Detail information of GWHGAAEX016902/evm.TU.scaffold_79.146
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116626609|ref|YP_828765.1| | 2.00E-20 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0610 | 2.00E-151 | Putative serine/threonine protein kinase |
| nr | gi|743792618|ref|XP_010923729.1| | 1.20E-158 | PREDICTED: protein kinase PINOID-like [Elaeis guineensis] |
| Swissprot | tr|Q2QM77|PID_ORYSJ | 2.00E-159 | Protein kinase PINOID |
| trEMBL | tr|I1R7U6|I1R7U6_ORYGL | 3.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA12G0160200.1} |
| TAIR | AT2G34650 | 2.00E-151 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000082 | 2767570 | 2769516 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016902
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module13 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 47 | 346 | 5.90E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.410 |
| SRR2545915 | Juvenile tuber | 0.880 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.340 |
| SRR5643514 | five period of Gastrodia elata | 0.950 | |
| SRR5643515 | five period of Gastrodia elata | 0.430 | |
| SRR5643524 | five period of Gastrodia elata | 0.740 | |
| SRR5643525 | five period of Gastrodia elata | 0.610 | |
| SRR5643528 | five period of Gastrodia elata | 0.340 | |
| SRR5643658 | five period of Gastrodia elata | 0.320 | |
| SRR5643659 | five period of Gastrodia elata | 1.490 | |
| SRR5643660 | five period of Gastrodia elata | 0.340 | |
| SRR5643661 | five period of Gastrodia elata | 1.110 | |
| SRR5643662 | five period of Gastrodia elata | 2.150 | |
| SRR5643663 | five period of Gastrodia elata | 1.930 | |
| SRR5643664 | five period of Gastrodia elata | 8.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.210 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.550 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.080 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.170 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.370 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.370 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.71 |
| Juven | Juvenile tuber | 0.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.27 | |
| Mother_Juven | Mother tuber of Juvenile | 0.25 |