Detail information of GWHGAAEX016907/evm.TU.scaffold_79.153


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122938|ref|XP_008784817.1|2.60E-57PREDICTED: glucan endo-1,3-beta-glucosidase 13 isoform X2 [Phoenix dactylifera]
Swissprottr|Q8VYE5|E1312_ARATH2.00E-33Glucan endo-1,3-beta-glucosidase 12 (Precursor)
trEMBLtr|B6TZD3|B6TZD3_MAIZE4.00E-54Putative uncharacterized protein {ECO:0000313|EMBL:ACG42466.1}
TAIRAT4G054303.00E-35Carbohydrate-binding X8 domain superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008229051842906910+
Transcript Sequence

Network for GWHGAAEX016907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X8481191.40E-21
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM43

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.060
SRR2545915Juvenile tuber0.180
SRP108465SRR5643513five period of Gastrodia elata0.950
SRR5643514five period of Gastrodia elata1.030
SRR5643515five period of Gastrodia elata1.120
SRR5643524five period of Gastrodia elata0.570
SRR5643525five period of Gastrodia elata5.780
SRR5643528five period of Gastrodia elata10.960
SRR5643658five period of Gastrodia elata5.050
SRR5643659five period of Gastrodia elata1.400
SRR5643660five period of Gastrodia elata0.460
SRR5643661five period of Gastrodia elata1.250
SRR5643662five period of Gastrodia elata1.310
SRR5643663five period of Gastrodia elata1.290
SRR5643664five period of Gastrodia elata1.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.610
SRR6049655Rhizomagastrodiae_C368-T10_good_10.970
SRR6049656Rhizomagastrodiae_C368-T07_good_10.130
SRR6049657Rhizomagastrodiae_C368-T07_good_10.400
SRR6049658Rhizomagastrodiae_C368-T04_good_11.180
SRR6049659Rhizomagastrodiae_C368-T04_good_11.480
SRR6049660Rhizomagastrodiae_C368-T01_good_12.640
SRR6049661Rhizomagastrodiae_C368-T04_good_11.590
SRR6049662Rhizomagastrodiae_C368-T01_good_11.610
SRR6049663Rhizomagastrodiae_C368-T01_good_11.820
SRR6049664Rhizomagastrodiae_C368-T10_good_10.850
SRR6049665Rhizomagastrodiae_C368-T10_good_10.850
SRP279888GastroGastrodia elata tuber 1.03
JuvenJuvenile tuber0.56
Mother_GastroMother tuber of Gastrodia elata 12.63
Mother_JuvenMother tuber of Juvenile 3.62