Detail information of GWHGAAEX016926/evm.TU.scaffold_79.173


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19471.00E-19Leucine rich repeat proteins, some proteins contain F-box
nrgi|695026294|ref|XP_009400437.1|5.93E-67PREDICTED: F-box/LRR-repeat protein At3g48880-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M2Z5|FBL53_ARATH4.00E-20F-box/LRR-repeat protein At3g48880
trEMBLtr|M0SXD6|M0SXD6_MUSAM2.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P10570_001}
TAIRAT3G488801.00E-19RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008233100513311417+
Transcript Sequence

Network for GWHGAAEX016926

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.800
SRR2545915Juvenile tuber24.320
SRP108465SRR5643513five period of Gastrodia elata26.390
SRR5643514five period of Gastrodia elata13.160
SRR5643515five period of Gastrodia elata12.700
SRR5643524five period of Gastrodia elata13.420
SRR5643525five period of Gastrodia elata40.940
SRR5643528five period of Gastrodia elata22.510
SRR5643658five period of Gastrodia elata57.500
SRR5643659five period of Gastrodia elata17.130
SRR5643660five period of Gastrodia elata18.550
SRR5643661five period of Gastrodia elata16.370
SRR5643662five period of Gastrodia elata25.630
SRR5643663five period of Gastrodia elata21.100
SRR5643664five period of Gastrodia elata36.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.540
SRR6049655Rhizomagastrodiae_C368-T10_good_133.190
SRR6049656Rhizomagastrodiae_C368-T07_good_127.890
SRR6049657Rhizomagastrodiae_C368-T07_good_145.300
SRR6049658Rhizomagastrodiae_C368-T04_good_147.450
SRR6049659Rhizomagastrodiae_C368-T04_good_159.850
SRR6049660Rhizomagastrodiae_C368-T01_good_125.360
SRR6049661Rhizomagastrodiae_C368-T04_good_145.870
SRR6049662Rhizomagastrodiae_C368-T01_good_111.280
SRR6049663Rhizomagastrodiae_C368-T01_good_111.070
SRR6049664Rhizomagastrodiae_C368-T10_good_120.740
SRR6049665Rhizomagastrodiae_C368-T10_good_120.740
SRP279888GastroGastrodia elata tuber 29.56
JuvenJuvenile tuber12.76
Mother_GastroMother tuber of Gastrodia elata 75.25
Mother_JuvenMother tuber of Juvenile 19.02