Detail information of GWHGAAEX016938/evm.TU.scaffold_79.187


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428771363|ref|YP_007163153.1|6.00E-170GTP-binding protein YchF [Cyanobacterium aponinum PCC 10605]
KOGKOG14910Predicted GTP-binding protein (ODN superfamily)
nrgi|743883683|ref|XP_010909483.1|0PREDICTED: obg-like ATPase 1 isoform X1 [Elaeis guineensis]
Swissprottr|Q851Q6|OBGC2_ORYSJ1.00E-12Probable GTP-binding protein OBGC2
trEMBLtr|B9RI48|B9RI48_RICCO0Obg-like ATPase 1 {ECO:0000256|HAMAP-Rule:MF_03167}
TAIRAT1G560500GTP-binding protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008236297543660037+
Transcript Sequence

Network for GWHGAAEX016938

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR1481649.90E-23
PF06071.12YchF-GTPase_C3294123.20E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.630
SRR2545915Juvenile tuber5.840
SRP108465SRR5643513five period of Gastrodia elata7.970
SRR5643514five period of Gastrodia elata11.300
SRR5643515five period of Gastrodia elata8.640
SRR5643524five period of Gastrodia elata9.320
SRR5643525five period of Gastrodia elata2.880
SRR5643528five period of Gastrodia elata2.980
SRR5643658five period of Gastrodia elata2.660
SRR5643659five period of Gastrodia elata4.260
SRR5643660five period of Gastrodia elata4.400
SRR5643661five period of Gastrodia elata4.610
SRR5643662five period of Gastrodia elata4.040
SRR5643663five period of Gastrodia elata5.990
SRR5643664five period of Gastrodia elata4.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.050
SRR6049655Rhizomagastrodiae_C368-T10_good_110.140
SRR6049656Rhizomagastrodiae_C368-T07_good_16.950
SRR6049657Rhizomagastrodiae_C368-T07_good_15.670
SRR6049658Rhizomagastrodiae_C368-T04_good_13.670
SRR6049659Rhizomagastrodiae_C368-T04_good_11.920
SRR6049660Rhizomagastrodiae_C368-T01_good_15.330
SRR6049661Rhizomagastrodiae_C368-T04_good_17.550
SRR6049662Rhizomagastrodiae_C368-T01_good_114.820
SRR6049663Rhizomagastrodiae_C368-T01_good_18.290
SRR6049664Rhizomagastrodiae_C368-T10_good_18.660
SRR6049665Rhizomagastrodiae_C368-T10_good_18.660
SRP279888GastroGastrodia elata tuber 5.66
JuvenJuvenile tuber3.28
Mother_GastroMother tuber of Gastrodia elata 2.00
Mother_JuvenMother tuber of Juvenile 3.33