Gene detail

Detail information of GWHGAAEX016941/evm.TU.scaffold_79.190

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743762053\|ref\|XP_010906185.1\|	2.91E-180	PREDICTED: uncharacterized protein LOC105033190 [Elaeis guineensis]
trEMBL	tr\|M0TNB0\|M0TNB0_MUSAM	2.00E-72	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P07070_001}
trEMBL	tr\|M0TNB0\|M0TNB0_MUSAM	3.00E-52	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P07070_001}
trEMBL	tr\|M0TNB0\|M0TNB0_MUSAM	7.00E-06	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P07070_001}
TAIR	AT2G34780	4.00E-33	maternal effect embryo arrest 22

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	3667409	3701087	-

Transcript Sequence
>GWHTAAEX016941 CTAATATGAGTTTGTTTCGTGTTTTCATGCAATTTGTCGTCTTTGCATTCGCTCGGAGTTCCGACCTTCATTCAAGATCTCGGAGCTTTCGTCTGCTGGATTCAAAAAACTTAAAATTGGATTTCGGTCTATTTGAGCTAAATAAATTTTTAATTCAAAATTTGATTATCTCATTTTTTTCTTAATTATATGATAATATAATTATTTTTAACGATTTAACTATAAAGTATTCATAATTTTGGCGCTGTGCAATAATTCTAGGTTAATTTTTATATTTCTATCGGATACTATGCTTAAAACAACTCTCATGGAGGCGGAATTCGCTTACTGACATGAAAATCTTATAGCTAACAAATGCCTTATAATTCTTTGATTTTGTTTTTCTTACAAAACCCCTAATCTTTAATCGCGCTCTTCAGTCTACCCTCCGGCGCTTTCATCATGTCGGAGGATACGCTATCCATATCCCCTAATCCTTGCTGTACAACGTGGATAAAGCGAACCCAGAAGTTGGAGAAGAGCAGGGACGCTCTCAGGCAAAGCGTAAAGATCCTGGAGGCACAGATAGGGAAACAGGCCGTCGAAATCACTGCTTTTAAAAAAGAGATTGATAAGCAGCAGGTGATATGTGACAAACAAAATGATGAAAGACTGAAAGAGGTTGATATGAAAAAGAAACTGGAGAAACAAATTCTAGATATGACGGTTACAATTTCTACGTTGGATAATATCAAGAGCTTGGAGGGTATTGATGAAGATGAAATTAACGTACTTAAAGCCTCTATTTCTGCCAGTCAGGAAGAAGTAAAAAACCTTAAGGGACATCTTGATAAGGAAAGAAGGAAAGCTGATGTTGAGGGTAGAAAAACAGAGTCTGAGAAAAAGAAAGCTGCAGAAGCTTGGAAGCTGCTGACGGACGAGAAAAAAAAGTTAGAAGAGCTGAAATGTCTTTTAGAGGCTGAGAAGAAGAAAGTTGAAGGCCTTAAATTTTGCTTGGAAAAATTAAAAGCTGAATCTAGTGAAGTGAGGGAGAAGTTGAGTGCAGAGATAGCTAAAGGTTGCGATGCTAAAAAGCAGATTGAAGTTGAAAAGTTAAAAGCAGATGGAGAGAAGAAGCGTGCTGACTCAGAAAGGATCAAAGCTGAAGAGCAAAAAAAACTTTTTGAAGAAGAGAGAAAAAGGGTTTTGGATGTAAAAAAACAAGTAAACTGTTTGTGTCAGAAGTTAGAGGACGAAAGGAGGAAGAGAAATAGAGCAAAAGTTCAGAAAAAGCTGGAGGATGCATCTGTGTTGTCTAATTTTAGAGACAGAGAACAAAATGTATCTAGAACTGCAGAAGCTGCTGATTTGAAGATTTTAAAGAAGCAACTTAAGCTGGAAAGAAAACGGGTGAAGCATGCAGATAGAGTAGCCAAGCATGAAAAATATGCAAGTAGAGTTCTTGGGCAGGAAATTCATCTCTTAAAGCAGAGCCTCACACAGATTCTCTATCGTCTTAACATGTTTGATGGCCTAATTTCTCTTAACACTGAAAGCACACGTAATGTAGAAAAGACTTTGAATTTTCAAGATTTGAAGTGCTTTAAGGTGAATGACTTCCGGCTTACAAATAAAGATGATTATGATTCACTGACTGAATTTAGGCCATCTGAAATTCAGTATGGGAATCCATTCACCTATGATGAACCTACAGGCGAATGCATTGGTCTTCCTGTATCTGGAAGATGCTGTATCAGACCAAAAACAGGTATAAATTCTGAGTTGGAGTCTCCGGTTGGAGGTTCTCTCAGAAACAAGTCACAAAGTTCTGCAGTATGTTCTACTAGCATGCATTTTTCTGATAGAAAGCTAATGGGATCACAGGGAAGAGATTCTGTTGTTGAGATCTCTACAAGCAAATTAACAGAGAATGCAAATACTGGTGTCATTGTTAAGGGGGTTTCTGGTGATATTGCCCATAAGCGAAAAAGTTGTTTGGTTTGTGCACAAGATACTGATGGAAGCACTGGTCTGATTGGAGTGGAGAAACCATGCTATAGATCATATAAGGTTGCTGCGCATATATGTGAGAATAGTTCAAAGAAACGAAAGATTGAAATTAATACCAAACGCTTAAATTCTGAAGCTAATAGTTTACCTTTGGTAATGGGAGATAAAGGTGCAGCTGTAGATGATAGATTGAGAAATATGAATTTATTTTCACTGGAAAATAGAGCACAGAGTCCAGCAGTGTTTGAGGGTATAGATCTTGAAAAAGTTTATCTGAAGGAAAGAGAAAATAACCTATGTAAAAGTAATAGTGATTACATTGCGACTGTAGCTTCTACCCACCCTCGAACTGCAAAATCAACCGTTAAATTCAGTAATAAGAAGAAAGCTAGTAAACCAATTAGCGGTTATAATAGGAACACTTTCTGTGTTCAGGAAGCTGCTCCAGATTCCTCTGAATTTGGCATTGAACCAACAGTGATTTCATTTGGAAACAAACAAACTTTTCTAAAGAGCTTTGAGAATATGATTAGTGGGGGTTGTCTGAAGCTGCTTGAACTGGACGATTTTTCTGATGAGATCAGGTACATAAATGCTTTAGAGAACCCTCTTTCTCCTACTTTACCAGAAATTGAGATACCTAACTACCAAATTGATAGAGAAGATGATTCTCTTGCTTTGATACCAAGAGATTATTCAGTGCCTTTTTGTTCATCTGATGTCATGGATTTGGAGATATTATCCAACAATTTACAGTCAAAAAATTTGACTCACAAAGAAATGTCAAATAGAAGCATTATTCGACAGAGTGCTTTATTTGATATCGCATCTGATGCTTTTCAAGAACAGCAAGAGCATTACGCAGAGCACTTTCCAGCAGAACATAACAATATTGAGCTTGAAGCATTTCCTGTTTCAAAGGCCTGTAGCGATAACTTTCCATGTAGATGCCAGACATCAGAACCATTATTTGTGGCAATTGGTGGATCTTCAGAACCGCTGCATTCTCAATTAATTCACGATATTATTCACCCTCCGAATGTTACATTAACTGATTGTGATTTGTCTGAGATCAAATTAAATGAAGCACTTGGAGGTTGTGAACCTATGAATTCTGATTTCATTCGAAATCAAGCAGAAGTTAAGATGATAGATGACAGTGTTTGTGCCCAAAGGTTAAACATAGTACTACCATCTGATGTGGATAAATTAACTCAAGGAAACAATTTAATCAGTGTAGAAGAATGCACAGGACATGATATACGACAGCAAATGGAGTCTGCTTTTATGCCAAAAGATTTTGTCCTAACATTTTTACCTTTTAGTTCAACAGTAAAACCTCCCTCTAAAACTGATGATGTATCTGACCCTGTAAAAAAAAAGCGTTTCGTTACTTCATTTACTAGTGCTAGGAACATGGATTGTATGTCAAAAATTATTTGTTCTTTGAGCTCTCTTACACCTCAAAAATTAATGATTTCTAAGGCAGACTCACTGATCATAGAATTTGTTGAATTTCAGCTGGAAGATTTCCAATCAGAGGAGAAGGCGGCTGTTTTCTTTTCACTTCTACTTAACAATTTAACTATTAGGATGTCAGATCATTGCAAGTACATTATGGATGAAGAATCTTTTCAGATATTGGAATCATTTTCTATGGAGATAGTTAGAGGGGTTTCTGCTGGAATGTTCAAATTCATTTTAGACAAAATGTTTCACTTAGATACCCTGTTTCATCTCATTGAGAGTTTTCTCATTACAAGAGAAGTTTTAGTAATAGGTGATGTACAGCATCACTCATCAAGCTTCCCTGCCATTACTGAACTCAAACTTCATATGAAGGCTGAAAATTGCTGTGTGATCTCTAAAGATGTTTCAACAAATGAATTCATCGCTGGTTGTACAATATTATCATCTATTTGTGTTGCAATTGATGATATTAGTTTCTTACTTCGTTTTTCTTACAAGATTATGAGAATGTGTCAAGATGACATCACTTGGGTTTTGCTAGCACTTCATGTTTTTGCGAATGTTTGTGGAAAGAGATTTTTCATCCATGAGAAGAGCAGTTTTCTTGTGACCACTATAAATTCTGTGGTTGCACTTATTGAGGAAAGATTTAAATTGATTTCATATCCTCTGCCTGACAATCCTAATTCAAGTAGAGTGTTTGCTGATTTCTTACCGTGTAAGCATTGTCCGTTTGCTGCTAATGCTATGTATATTGACAAACTTGTAAGCTCTCTACTGGATGCTCTGGAAAATTATAGCCTCAATGGAGGTGACTACTCATGTACAATTAACTTCCCTTTAAACAGAACTGCTCCTACAAGAATTATTAAGGACAAAAATTCAAGTGCTACTGAAAGCAAATTTGATACTAGGTGTGATGTTACTTGCTCAATATTTAGGTACAGGAAGCTTGCTGGAAATCAGTCTGATAGCTGCTTAGAGACAATGCTTTGTGACTATGCTGATATTATTTCGTTGGTGGAGTTGGTGGCCTGCTACATGGGATGGGTATGGATGTACAATGAAACAATGCCCCGTTTGTTGAAAATGCTGGAAGTTTGTGCTCTTGAGGAATATCTAGTCGCTCTTTTTGTATTAGTTGGCGAACTGGGAAGACTTGGTTGTGCTTCTTGTGACTATCAGCAAGCAGGTATAGCAGACTTAAGAAGAAAGCTGGCTGATCTGTTCAATACCCTCATCACTAGAAATGCAAGCCTGCCGACTCAAGTCGCTGCTGTTGGTGCTATGCTCAATCTTCTTCCTTTGAAATATCATGATATTTCATATAGGGATGATAATAATCTGAGTTCATGCGAATCTCGCTGCATCAACCATATTCAGAAATGGTTTTTTGGTCTAAGTGGGGAACAACAGGTTGCATTAAGAGATATTTTTGACTATAAAAACTACCAAAGTTCAATTTCAGTGCAAAACCCCACTGCCTCAATTTTTCAGCCAGTTTCTGATGCCTGAGTGAAAAAGATTAATGGCAAAACTAACATCTAATCACAGCATCTGACTAGCAAATGTGCGAGTTCTGCTCTCCGGCCACTCATTCAAAGCACTGAATCAGCAATTTTGACCTTATTTCACAGACCATAATACTCTGCGAGGCTCTCCCGATGCTGAAGCCGAGTGGAAAAAGGATCTCAGTGTTCATTGCCTTACTCTGAAAGTTCTCTTTCTACTTATTTTAATGTTTTTTAAATCGATTTTGGAGCATTCCTCATTTGTTGGGATTATTCTTCATTCTATTATTCTAATGTTTTTTACATGATATTGGAGCACTCTTCTTTCTAGTATTTTACTATTTTTTAAACATGTAAATATAAAAGATTTTGTAGTGATAGAGTTGAGATTTTTTCTAACTTCAGGATGGATGTATGGAGGACAGCGTTCATTCTTTAGGGACTGCATACATTTTTTTTAATATATGGGTGCAAATAAGGATAAATTTGCTTGTGCTTGTGTG

Network for GWHGAAEX016941

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX016941
MSEDTLSISPNPCCTTWIKRTQKLEKSRDALRQSVKILEAQIGKQAVEITAFKKEIDKQQVICDKQNDERLKEVDMKKKLEKQILDMTVTISTLDNIKSLEGIDEDEINVLKASISASQEEVKNLKGHLDKERRKADVEGRKTESEKKKAAEAWKLLTDEKKKLEELKCLLEAEKKKVEGLKFCLEKLKAESSEVREKLSAEIAKGCDAKKQIEVEKLKADGEKKRADSERIKAEEQKKLFEEERKRVLDVKKQVNCLCQKLEDERRKRNRAKVQKKLEDASVLSNFRDREQNVSRTAEAADLKILKKQLKLERKRVKHADRVAKHEKYASRVLGQEIHLLKQSLTQILYRLNMFDGLISLNTESTRNVEKTLNFQDLKCFKVNDFRLTNKDDYDSLTEFRPSEIQYGNPFTYDEPTGECIGLPVSGRCCIRPKTGINSELESPVGGSLRNKSQSSAVCSTSMHFSDRKLMGSQGRDSVVEISTSKLTENANTGVIVKGVSGDIAHKRKSCLVCAQDTDGSTGLIGVEKPCYRSYKVAAHICENSSKKRKIEINTKRLNSEANSLPLVMGDKGAAVDDRLRNMNLFSLENRAQSPAVFEGIDLEKVYLKERENNLCKSNSDYIATVASTHPRTAKSTVKFSNKKKASKPISGYNRNTFCVQEAAPDSSEFGIEPTVISFGNKQTFLKSFENMISGGCLKLLELDDFSDEIRYINALENPLSPTLPEIEIPNYQIDREDDSLALIPRDYSVPFCSSDVMDLEILSNNLQSKNLTHKEMSNRSIIRQSALFDIASDAFQEQQEHYAEHFPAEHNNIELEAFPVSKACSDNFPCRCQTSEPLFVAIGGSSEPLHSQLIHDIIHPPNVTLTDCDLSEIKLNEALGGCEPMNSDFIRNQAEVKMIDDSVCAQRLNIVLPSDVDKLTQGNNLISVEECTGHDIRQQMESAFMPKDFVLTFLPFSSTVKPPSKTDDVSDPVKKKRFVTSFTSARNMDCMSKIICSLSSLTPQKLMISKADSLIIEFVEFQLEDFQSEEKAAVFFSLLLNNLTIRMSDHCKYIMDEESFQILESFSMEIVRGVSAGMFKFILDKMFHLDTLFHLIESFLITREVLVIGDVQHHSSSFPAITELKLHMKAENCCVISKDVSTNEFIAGCTILSSICVAIDDISFLLRFSYKIMRMCQDDITWVLLALHVFANVCGKRFFIHEKSSFLVTTINSVVALIEERFKLISYPLPDNPNSSRVFADFLPCKHCPFAANAMYIDKLVSSLLDALENYSLNGGDYSCTINFPLNRTAPTRIIKDKNSSATESKFDTRCDVTCSIFRYRKLAGNQSDSCLETMLCDYADIISLVELVACYMGWVWMYNETMPRLLKMLEVCALEEYLVALFVLVGELGRLGCASCDYQQAGIADLRRKLADLFNTLITRNASLPTQVAAVGAMLNLLPLKYHDISYRDDNNLSSCESRCINHIQKWFFGLSGEQQVALRDIFDYKNYQSSISVQNPTASIFQPVSDA

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.040
SRP064423	SRR2545915	Juvenile tuber	12.450
SRP108465	SRR5643513	five period of Gastrodia elata	8.050
	SRR5643514	five period of Gastrodia elata	9.170
	SRR5643515	five period of Gastrodia elata	8.310
	SRR5643524	five period of Gastrodia elata	9.590
	SRR5643525	five period of Gastrodia elata	7.720
	SRR5643528	five period of Gastrodia elata	6.500
	SRR5643658	five period of Gastrodia elata	7.640
	SRR5643659	five period of Gastrodia elata	9.540
	SRR5643660	five period of Gastrodia elata	10.950
	SRR5643661	five period of Gastrodia elata	8.600
	SRR5643662	five period of Gastrodia elata	8.890
	SRR5643663	five period of Gastrodia elata	9.750
	SRR5643664	five period of Gastrodia elata	9.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.860
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.490
SRP279888	Gastro	Gastrodia elata tuber	9.21
	Juven	Juvenile tuber	6.93
	Mother_Gastro	Mother tuber of Gastrodia elata	7.22
	Mother_Juven	Mother tuber of Juvenile	7.05