Detail information of GWHGAAEX016942/evm.TU.scaffold_79.191
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|255531589|ref|YP_003091961.1| | 1.00E-39 | fatty acid hydroxylase [Pedobacter heparinus DSM 2366] |
| KOG | KOG0539 | 1.00E-109 | Sphingolipid fatty acid hydroxylase |
| nr | gi|672139577|ref|XP_008793575.1| | 1.22E-127 | PREDICTED: fatty acid 2-hydroxylase 1 [Phoenix dactylifera] |
| Swissprot | tr|O48916|FAH1_ARATH | 4.00E-110 | Fatty acid 2-hydroxylase 1 |
| trEMBL | tr|M0RSX4|M0RSX4_MUSAM | 6.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16940_001} |
| TAIR | AT2G34770 | 1.00E-109 | fatty acid hydroxylase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000082 | 3720364 | 3743460 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016942
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04116.12 | FA_hydroxylase | 191 | 329 | 1.90E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0008610 | Biological Process | lipid biosynthetic process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.560 |
| SRR2545915 | Juvenile tuber | 5.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.200 |
| SRR5643514 | five period of Gastrodia elata | 6.180 | |
| SRR5643515 | five period of Gastrodia elata | 5.380 | |
| SRR5643524 | five period of Gastrodia elata | 6.800 | |
| SRR5643525 | five period of Gastrodia elata | 7.620 | |
| SRR5643528 | five period of Gastrodia elata | 5.950 | |
| SRR5643658 | five period of Gastrodia elata | 5.360 | |
| SRR5643659 | five period of Gastrodia elata | 7.550 | |
| SRR5643660 | five period of Gastrodia elata | 5.310 | |
| SRR5643661 | five period of Gastrodia elata | 7.390 | |
| SRR5643662 | five period of Gastrodia elata | 5.580 | |
| SRR5643663 | five period of Gastrodia elata | 5.880 | |
| SRR5643664 | five period of Gastrodia elata | 4.020 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 8.410 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.420 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.170 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.620 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.040 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.49 |
| Juven | Juvenile tuber | 2.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.84 | |
| Mother_Juven | Mother tuber of Juvenile | 2.33 |