Detail information of GWHGAAEX016946/evm.TU.scaffold_79.195


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|659134166|ref|XP_008467061.1|3.82E-24PREDICTED: LOB domain-containing protein 4-like, partial [Cucumis melo]
Swissprottr|Q9SA51|LBD3_ARATH8.00E-19LOB domain-containing protein 3
trEMBLtr|V7AKI8|V7AKI8_PHAVU1.00E-23Uncharacterized protein {ECO:0000313|EMBL:ESW05373.1}
TAIRAT1G165303.00E-18ASYMMETRIC LEAVES 2-like 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008237958513831183-
Transcript Sequence

Network for GWHGAAEX016946

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB991502.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.880
SRR2545915Juvenile tuber22.810
SRP108465SRR5643513five period of Gastrodia elata31.160
SRR5643514five period of Gastrodia elata14.820
SRR5643515five period of Gastrodia elata14.180
SRR5643524five period of Gastrodia elata9.000
SRR5643525five period of Gastrodia elata112.460
SRR5643528five period of Gastrodia elata110.910
SRR5643658five period of Gastrodia elata53.300
SRR5643659five period of Gastrodia elata74.750
SRR5643660five period of Gastrodia elata59.090
SRR5643661five period of Gastrodia elata71.580
SRR5643662five period of Gastrodia elata3.960
SRR5643663five period of Gastrodia elata13.010
SRR5643664five period of Gastrodia elata7.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.270
SRR6049655Rhizomagastrodiae_C368-T10_good_18.970
SRR6049656Rhizomagastrodiae_C368-T07_good_149.020
SRR6049657Rhizomagastrodiae_C368-T07_good_136.860
SRR6049658Rhizomagastrodiae_C368-T04_good_128.810
SRR6049659Rhizomagastrodiae_C368-T04_good_118.950
SRR6049660Rhizomagastrodiae_C368-T01_good_133.440
SRR6049661Rhizomagastrodiae_C368-T04_good_145.900
SRR6049662Rhizomagastrodiae_C368-T01_good_151.700
SRR6049663Rhizomagastrodiae_C368-T01_good_144.560
SRR6049664Rhizomagastrodiae_C368-T10_good_138.290
SRR6049665Rhizomagastrodiae_C368-T10_good_138.290
SRP279888GastroGastrodia elata tuber 13.42
JuvenJuvenile tuber29.88
Mother_GastroMother tuber of Gastrodia elata 6.82
Mother_JuvenMother tuber of Juvenile 23.36