Detail information of GWHGAAEX016948/evm.TU.scaffold_79.197


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30623.00E-111RNA polymerase II elongator associated protein
nrgi|743763313|ref|XP_010911835.1|3.38E-136PREDICTED: protein KTI12 homolog [Elaeis guineensis]
trEMBLtr|M0SGR2|M0SGR2_MUSAM1.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P21960_001}
TAIRAT1G138703.00E-111calmodulin binding;purine nucleotide binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008238342033862580-
Transcript Sequence

Network for GWHGAAEX016948

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08433.9KTI1212323.60E-66
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.560
SRR2545915Juvenile tuber29.310
SRP108465SRR5643513five period of Gastrodia elata16.950
SRR5643514five period of Gastrodia elata13.980
SRR5643515five period of Gastrodia elata16.300
SRR5643524five period of Gastrodia elata13.300
SRR5643525five period of Gastrodia elata33.300
SRR5643528five period of Gastrodia elata33.020
SRR5643658five period of Gastrodia elata29.660
SRR5643659five period of Gastrodia elata23.310
SRR5643660five period of Gastrodia elata23.810
SRR5643661five period of Gastrodia elata20.220
SRR5643662five period of Gastrodia elata29.020
SRR5643663five period of Gastrodia elata28.460
SRR5643664five period of Gastrodia elata28.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.970
SRR6049655Rhizomagastrodiae_C368-T10_good_114.140
SRR6049656Rhizomagastrodiae_C368-T07_good_120.740
SRR6049657Rhizomagastrodiae_C368-T07_good_128.220
SRR6049658Rhizomagastrodiae_C368-T04_good_128.370
SRR6049659Rhizomagastrodiae_C368-T04_good_136.000
SRR6049660Rhizomagastrodiae_C368-T01_good_123.260
SRR6049661Rhizomagastrodiae_C368-T04_good_125.630
SRR6049662Rhizomagastrodiae_C368-T01_good_116.260
SRR6049663Rhizomagastrodiae_C368-T01_good_119.280
SRR6049664Rhizomagastrodiae_C368-T10_good_116.360
SRR6049665Rhizomagastrodiae_C368-T10_good_116.360
SRP279888GastroGastrodia elata tuber 34.61
JuvenJuvenile tuber28.32
Mother_GastroMother tuber of Gastrodia elata 22.43
Mother_JuvenMother tuber of Juvenile 27.74