Detail information of GWHGAAEX016954/evm.TU.scaffold_79.203


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG45614.00E-119Uncharacterized conserved protein, contains TBC domain
nrgi|743761516|ref|XP_010942653.1|2.47E-138PREDICTED: transmembrane protein 56 [Elaeis guineensis]
trEMBLtr|M0RGG2|M0RGG2_MUSAM1.00E-131Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P08360_001}
TAIRAT1G313004.00E-119TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008239641043989874-
Transcript Sequence

Network for GWHGAAEX016954

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.15TRAM_LAG1_CLN8622547.90E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.480
SRR2545915Juvenile tuber21.190
SRP108465SRR5643513five period of Gastrodia elata16.000
SRR5643514five period of Gastrodia elata17.630
SRR5643515five period of Gastrodia elata17.810
SRR5643524five period of Gastrodia elata16.380
SRR5643525five period of Gastrodia elata16.000
SRR5643528five period of Gastrodia elata14.350
SRR5643658five period of Gastrodia elata18.930
SRR5643659five period of Gastrodia elata14.450
SRR5643660five period of Gastrodia elata12.870
SRR5643661five period of Gastrodia elata13.910
SRR5643662five period of Gastrodia elata12.120
SRR5643663five period of Gastrodia elata17.660
SRR5643664five period of Gastrodia elata14.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.130
SRR6049655Rhizomagastrodiae_C368-T10_good_17.670
SRR6049656Rhizomagastrodiae_C368-T07_good_113.470
SRR6049657Rhizomagastrodiae_C368-T07_good_113.910
SRR6049658Rhizomagastrodiae_C368-T04_good_112.770
SRR6049659Rhizomagastrodiae_C368-T04_good_114.290
SRR6049660Rhizomagastrodiae_C368-T01_good_110.600
SRR6049661Rhizomagastrodiae_C368-T04_good_115.460
SRR6049662Rhizomagastrodiae_C368-T01_good_116.230
SRR6049663Rhizomagastrodiae_C368-T01_good_19.990
SRR6049664Rhizomagastrodiae_C368-T10_good_113.330
SRR6049665Rhizomagastrodiae_C368-T10_good_113.330
SRP279888GastroGastrodia elata tuber 19.93
JuvenJuvenile tuber11.99
Mother_GastroMother tuber of Gastrodia elata 21.91
Mother_JuvenMother tuber of Juvenile 11.69