Detail information of GWHGAAEX016955/evm.TU.scaffold_79.206


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11001.00E-51Predicted E3 ubiquitin ligase
nrgi|743880260|ref|XP_010908606.1|2.98E-72PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Elaeis guineensis]
Swissprottr|Q9LDD1|BRG3_ARATH3.00E-52Probable BOI-related E3 ubiquitin-protein ligase 3
trEMBLtr|M0STW9|M0STW9_MUSAM1.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P32070_001}
TAIRAT3G129201.00E-51SBP (S-ribonuclease binding protein) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008240421384043116+
Transcript Sequence

Network for GWHGAAEX016955

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.400
SRR2545915Juvenile tuber10.470
SRP108465SRR5643513five period of Gastrodia elata70.270
SRR5643514five period of Gastrodia elata46.070
SRR5643515five period of Gastrodia elata99.000
SRR5643524five period of Gastrodia elata51.880
SRR5643525five period of Gastrodia elata142.350
SRR5643528five period of Gastrodia elata74.760
SRR5643658five period of Gastrodia elata71.050
SRR5643659five period of Gastrodia elata39.590
SRR5643660five period of Gastrodia elata40.700
SRR5643661five period of Gastrodia elata41.070
SRR5643662five period of Gastrodia elata47.050
SRR5643663five period of Gastrodia elata59.450
SRR5643664five period of Gastrodia elata83.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.940
SRR6049655Rhizomagastrodiae_C368-T10_good_154.960
SRR6049656Rhizomagastrodiae_C368-T07_good_141.270
SRR6049657Rhizomagastrodiae_C368-T07_good_155.110
SRR6049658Rhizomagastrodiae_C368-T04_good_155.810
SRR6049659Rhizomagastrodiae_C368-T04_good_147.900
SRR6049660Rhizomagastrodiae_C368-T01_good_130.730
SRR6049661Rhizomagastrodiae_C368-T04_good_149.320
SRR6049662Rhizomagastrodiae_C368-T01_good_133.110
SRR6049663Rhizomagastrodiae_C368-T01_good_130.540
SRR6049664Rhizomagastrodiae_C368-T10_good_145.280
SRR6049665Rhizomagastrodiae_C368-T10_good_145.280
SRP279888GastroGastrodia elata tuber 42.11
JuvenJuvenile tuber37.71
Mother_GastroMother tuber of Gastrodia elata 30.28
Mother_JuvenMother tuber of Juvenile 16.37