Gene detail

Detail information of GWHGAAEX016965/evm.TU.scaffold_79.218

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337288396\|ref\|YP_004627868.1\|	5.00E-08	Methyltransferase-16 [Thermodesulfobacterium geofontis OPF15]
KOG	KOG2793	2.00E-68	Putative N2,N2-dimethylguanosine tRNA methyltransferase
nr	gi\|695057054\|ref\|XP_009416781.1\|	2.50E-86	PREDICTED: protein N-lysine methyltransferase METTL21A-like [Musa acuminata subsp. malaccensis]
trEMBL	tr\|G7LES3\|G7LES3_MEDTR	3.00E-72	Methyltransferase family protein, putative {ECO:0000313\|EMBL:AET03926.1}
TAIR	AT5G49560	2.00E-68	Putative methyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	4245295	4255529	-

Transcript Sequence
>GWHTAAEX016965 TTAGACCCTAATCTTGATCCCCAGCACTATAAATACGGCCCTATAGCGAATCACCCTAGTCGGGCCCTTTTTTTTTATTTCGCGGAATCAGATTTTCGTTGAAATGGAAGCCGGAGGAGCCGATGAAGCCGACGCAAATCTCCTCACCATCTTTTGTGAAGATCTTGATCCTCGGCAAGAAGAAGAAGAGGAAAAGCATCTCAATCCATCGCAGCACTCCCATTCGGATCACCGCCACCATCTAACCAGCCTCAACGCCTCGATCGTCACCCGTCAGCTTCCTTCCCATGGCCTCTCCTTCCAGCTCTGGCCCTCCGCCTTCTCATTCGTCTCCCTCCTCGATCGCAACCCCTCCGCACTTCTCCTTCCTTCCTCTTCCCCGATCCGCATCCTCGAACTCGGCTCCGGCACTGGCCTTGTAGGAATCGCCGCCGCCGCTATTCTCGGCGCAGATGTGACCCTCACTGATCTCCCACATGCCCTCCCCAATCTTCGATTCAACGCGATTGAGAACGCTGAAGTTGCCGCAGCCCGAGGCGGATCTGTCGCCGTGCGCCTGCTGCGGTGGGGTGTCGCAGAGGACTTCGATGAAATCGGATCGACGAATCCTTCCTTCAACGCAGTTATTGCGTCGGATGTGGTCTATTATGAAGATCTGATTGAACCGCTGCTGGAGACGGTTAGGATTATTGTGCAGGGGGAGGTGGGGTTTCTGATGGCGCATTTGAAAAGGTGGAGAAGGATAGATGCAGCGTTCTTCCGAAGAGCGAGGAAGTTCTTTGATGTGCTGAAGATTCACGCCGACCCGCCTGCTAACGGATCGAGAACAGGCGTCGTTATTTACCGTTTCACGGCGAAGAGAAGATCGACGGAGGATTCATTGTCGTAATATCTTCTTATTGTGCACAAACAGATCTGGCTTTGGTTCGACCATCACCTCGCTCTTACCGACGAAGACGGCGCCTGAAGTTGAAGACGACGCCCTTCCTTGATGAAATCTAACTGCATCCCTGCCGCCATTCTTCTATTGGATTTTTTTTTTCTCTTGCATTCCCGTGACGAACGAAGACGAAGATGAATCCCGTGACGAACGAAGATGAAGACGTCCTATCTGCTGCCATCAAACGACGACGACATTCTCTCCTCTGCCCTAAAACGACAAAGACTAAGTTGATCTTTTTTCGACACTCTCCACCGACGGTTGTTGTCCTCTGTCGAAGCGACATCAACCCACAGCTTGCTTTCCCGACATCACTACAGTCACAAGATTTGCTTGATTTACGCCATGAAAATTGACAAAGATTGTAGCCACTCCTCTCCTTGTCCACGATTGCGATCGAAGTGAGGAGATCGTTAGCAGTTTGCTGCAGGCCCAATTTCTAAAAAATTCAGGTATACAATGCAATAGGTCAGATTTATTGTTTATATGTGGTCAAATGCATTGCTCTGTTATACAAGATTTGTGAGGATTAGTGATTTGTGTCATGCTTTTGCTTAAGAAGTTCATTATTGTCAATAAAGTTTCTTCTAGTTAATACGGTGATATATTTCTTAATGCCCAAAGATGTAATATTTCAAAATTTCTACTTATTAGCATTAAATAGAAACACCACTAAGGATTAGTGCTAGTGATGATAGGATTCGCTTGATTGAATGTTTGAGAAGGATTTAATTATGTTCTTGAATGCAGGTTCATTTAACAAATATATTGTCTTATGGACATGCAATAAATTTTTATGTCATTAAATAATCTTTGATTTTTGTCCCATGAAGGTGTAGGTGTCAAATAGATATAAAGCCAGAGTGTTATGATATCTTCAACAACTATTGTTTAATTTATTCTTTTGTCTTTGTTACTGCATGCTTTTTATTTGCCAATAACTTCAGTTTTAATGTTTATATTTTAGTTTAGATGTTTATTTTCAAGGTGTATTGAATTTATTTATTATGTGTAGTTTATCTTAGTGCACAAATATATACACATGCATGCAAAAGAATCATGCCCCAGCTCTTTGATAATGTTAGCAATTTTGGAGACCGAACATTGCCAATGATGAGCGAATTGCGATGGAATGTTGAGCGCCATTAGGTCTACACATGGATAATAACTCAGACATTCACGATGATAGTGCATGATACAAATAATTTAAAATAATATATAAAAGTTCATGTTATCTTAAGGTAGTGATTGTTAACTCGAGAAAGAAAGAAGACAAATATATAATGTTTATTAAAAGCAAGAGGGAGATTTCATGAACACGAGGCTTCTAATCACAATAAAAATAATTATTGTGGTAATTTCAATAAGGTAACATTCATGTATTAAAAGAAAAAGAACATTAAAATGAATTCTCTTGCATAGATTAAAGATAAATTCATAAAAATGTGAGCAAAGCATTCTCCTTAGTTGATTAAACATTTGAATCGTCGTAAAATATGTGCTGTCACAATAGTTAAATGATGAGATGCTTATAAGTGTTAAATTGTGTTAATTGTTTTAATGCATGTTTAGAATTGTTAAACAATTGTGCCAATAAAAGTGATCTTGTGTCTAAAATTGAAAAAAAAATTCTTAAAGTCCTTGATGTAGGAATGAGCTTTTGTTTTCTTGAGGAAGCATTCAAATTTTACAAATTTATATGAGTACTACAGTGGTTTTGGAGTTAG

Network for GWHGAAEX016965

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10294.8	Methyltransf_16	61	223	5.30E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.780
SRP064423	SRR2545915	Juvenile tuber	4.510
SRP108465	SRR5643513	five period of Gastrodia elata	8.650
	SRR5643514	five period of Gastrodia elata	5.980
	SRR5643515	five period of Gastrodia elata	8.310
	SRR5643524	five period of Gastrodia elata	5.720
	SRR5643525	five period of Gastrodia elata	7.420
	SRR5643528	five period of Gastrodia elata	7.710
	SRR5643658	five period of Gastrodia elata	7.280
	SRR5643659	five period of Gastrodia elata	6.830
	SRR5643660	five period of Gastrodia elata	8.160
	SRR5643661	five period of Gastrodia elata	8.400
	SRR5643662	five period of Gastrodia elata	11.490
	SRR5643663	five period of Gastrodia elata	7.360
	SRR5643664	five period of Gastrodia elata	5.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.170
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.450
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.840
SRP279888	Gastro	Gastrodia elata tuber	4.82
	Juven	Juvenile tuber	8.17
	Mother_Gastro	Mother tuber of Gastrodia elata	9.96
	Mother_Juven	Mother tuber of Juvenile	10.44