Detail information of GWHGAAEX016978/evm.TU.scaffold_79.234


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15892653|ref|NP_360367.1|0cysteine desulfurase [Rickettsia conorii str. Malish 7]
KOGKOG15490Cysteine desulfurase NFS1
nrgi|672199199|ref|XP_008777552.1|0PREDICTED: cysteine desulfurase 1, mitochondrial-like [Phoenix dactylifera]
Swissprottr|O49543|NFS1_ARATH0Cysteine desulfurase 1, mitochondrial (Precursor)
trEMBLtr|F6GZ61|F6GZ61_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB45247.1}
TAIRAT5G657200nitrogen fixation S (NIFS)-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008246864714688479+
Transcript Sequence

Network for GWHGAAEX016978

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00266.18Aminotran_5644252.10E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04487iscS, NFS1 Metabolic pathways map01100
Thiamine metabolismmap00730
Sulfur relay systemmap04122

Gene Ontology

GO term OntologyName
GO:0044571Biological Process[2Fe-2S] cluster assembly
GO:0003824Molecular Functioncatalytic activity
GO:0031071Molecular Functioncysteine desulfurase activity
GO:0030170Molecular Functionpyridoxal phosphate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.800
SRR2545915Juvenile tuber50.090
SRP108465SRR5643513five period of Gastrodia elata70.820
SRR5643514five period of Gastrodia elata56.200
SRR5643515five period of Gastrodia elata57.880
SRR5643524five period of Gastrodia elata58.660
SRR5643525five period of Gastrodia elata74.350
SRR5643528five period of Gastrodia elata56.710
SRR5643658five period of Gastrodia elata50.430
SRR5643659five period of Gastrodia elata67.650
SRR5643660five period of Gastrodia elata64.810
SRR5643661five period of Gastrodia elata63.310
SRR5643662five period of Gastrodia elata59.550
SRR5643663five period of Gastrodia elata63.790
SRR5643664five period of Gastrodia elata63.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.340
SRR6049655Rhizomagastrodiae_C368-T10_good_149.480
SRR6049656Rhizomagastrodiae_C368-T07_good_156.690
SRR6049657Rhizomagastrodiae_C368-T07_good_171.520
SRR6049658Rhizomagastrodiae_C368-T04_good_143.460
SRR6049659Rhizomagastrodiae_C368-T04_good_150.290
SRR6049660Rhizomagastrodiae_C368-T01_good_156.140
SRR6049661Rhizomagastrodiae_C368-T04_good_148.050
SRR6049662Rhizomagastrodiae_C368-T01_good_147.200
SRR6049663Rhizomagastrodiae_C368-T01_good_145.020
SRR6049664Rhizomagastrodiae_C368-T10_good_167.420
SRR6049665Rhizomagastrodiae_C368-T10_good_167.420
SRP279888GastroGastrodia elata tuber 59.04
JuvenJuvenile tuber93.60
Mother_GastroMother tuber of Gastrodia elata 58.84
Mother_JuvenMother tuber of Juvenile 70.76