Detail information of GWHGAAEX016984/evm.TU.scaffold_8.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33841.00E-78Selenoprotein
nrgi|18390562|ref|NP_563747.1|5.54E-77selenoprotein family protein [Arabidopsis thaliana]
trEMBLtr|Q8GWP6|Q8GWP6_ARATH2.00E-77Selenoprotein-like protein {ECO:0000313|EMBL:AEE27884.1}
TAIRAT1G057201.00E-78selenoprotein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000004860892897630-
Transcript Sequence

Network for GWHGAAEX016984

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08806.10Sep15_SelM771491.10E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms76.930
SRR2545915Juvenile tuber62.220
SRP108465SRR5643513five period of Gastrodia elata59.330
SRR5643514five period of Gastrodia elata71.140
SRR5643515five period of Gastrodia elata63.380
SRR5643524five period of Gastrodia elata66.490
SRR5643525five period of Gastrodia elata99.340
SRR5643528five period of Gastrodia elata118.080
SRR5643658five period of Gastrodia elata118.710
SRR5643659five period of Gastrodia elata43.790
SRR5643660five period of Gastrodia elata43.280
SRR5643661five period of Gastrodia elata42.570
SRR5643662five period of Gastrodia elata62.810
SRR5643663five period of Gastrodia elata56.820
SRR5643664five period of Gastrodia elata61.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.780
SRR6049655Rhizomagastrodiae_C368-T10_good_128.870
SRR6049656Rhizomagastrodiae_C368-T07_good_152.560
SRR6049657Rhizomagastrodiae_C368-T07_good_151.400
SRR6049658Rhizomagastrodiae_C368-T04_good_153.460
SRR6049659Rhizomagastrodiae_C368-T04_good_155.630
SRR6049660Rhizomagastrodiae_C368-T01_good_149.060
SRR6049661Rhizomagastrodiae_C368-T04_good_151.210
SRR6049662Rhizomagastrodiae_C368-T01_good_155.810
SRR6049663Rhizomagastrodiae_C368-T01_good_146.410
SRR6049664Rhizomagastrodiae_C368-T10_good_165.320
SRR6049665Rhizomagastrodiae_C368-T10_good_165.320
SRP279888GastroGastrodia elata tuber 82.06
JuvenJuvenile tuber41.16
Mother_GastroMother tuber of Gastrodia elata 60.90
Mother_JuvenMother tuber of Juvenile 38.82