Gene detail

Detail information of GWHGAAEX016987/evm.TU.scaffold_8.17

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672117442\|ref\|XP_008781906.1\|	0	PREDICTED: uncharacterized protein LOC103701561 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0TEU6\|M0TEU6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P05060_001}
TAIR	AT2G18850	5.00E-59	SET domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	1086882	1156560	-

Transcript Sequence
>GWHTAAEX016987 GAGAGCTATCATTGTGTGCTGATGTCTTACATTGAAATGGCTTTCTGTTCATTTCAGGAAATTCATGTAGCCTGCAATGAGCAAGTACAGGGAGATGGTGCTTTAACTTTGTGCCTGCCCACTATAGATGAGAAAGACCCATTATTCTTGGAAAAGAAGAAGCTGTCACATGCCAGGAAACTCAAATTCAAATTCCAGTTACTGCTACCTTCACAGGGAGATGAGTTGCTTATATTATTGGATGATATTGTTCGAACATCACGAATAATCTATCTAAATCATATTGAAATTTATTTCATTGACGATGAAGATTTTGGACCATTCAGCCAAAGAAACGAGCTTGTGTCCCTTAATGCAATACTACAAATGCTGAAATCTATGCTTGTTGGTGATAGGCCCAATAAATTTGAAGCTTTGAATGAGTTGCACAATGCAGTCATTGCTAGGATTAACTCAATTGCAGATGAGAACATTTACAATATGATAATAAAGAATTTTAATACGACTTCTGAGGAGTTACTCTTAAAGTGGGCTAAAAGCTGTGGTGCATGCTCAAAAATCAAGTTAGAATATTTTGAGGGGGCTAATAGAGGAGCAGTAGCTCTAGAGGACATTCATGTTGGTGAAAGTGCTCTGGAAATTCCAGAATCAATCATCATATCTGAAGATCTTCTTCATGAATCTGATATGTTTAAAGTTTTGAAGGAATGGGATGGTATGACAACTGACACGATGTTACTATTGTGGAGTATGAGAGAACGATACAACCCCCTTTCAAAGTTCATGCACTACTTTAAAACATTACCAGACTCTTTCAATACAGGGTTGAGTTTTGGAATCGATGCTCTTGCTATACTGCATGGTACTCTGCTTTTAGAAGAAGTACATCAAGCTATAGAGCACTTGCGACAACAGTACGAGTCACTTTGTCCAGCGTTATGCAGTAGCTACCCAGATATTTTCAAACCTGAGTTATACTCATGGGATCATTTTCTTTGGGCTTGTGAACTCTGGTATTCTAATGGTATGAAAGTTGTTTTTAGTGATGGAAAGCTCAGGACCTGCTTGGTTCCAGTTGCTGGGATGCTTAACCATTCGCTGTTCCCCCATATAATTCACTACGGTAGAGTAGACTTAGAAACAAAATGCTTAAAATTTCACCTTGCAAGGCAATGCAAAAAAGGAGACCAATGTTTTCTTAGTTATGGAAGCTTTTCTGGATCTCATTTGGTTATGTTCTATGGGTTTTTGCCAAAAGGAGACAATCCATATGATGTAGTTCCTTTAGATTTTGAGGTTTCTGAAGCTGACAACTGCCAAACTCAAAACCTAGAGAGTTCCACGAGAAGTCACATGGTGCGAGGCTCTTGGTTGTCGAGGAGTCATAATCCCTACACATATGGGTTGCCTTCATTGCTTTTGGCCCATCTCCGCTCAGTTATGAATGGTGGCTACATGAAGGAGGTTTCTATGACTTCTAGAGACAATGAAATTGAGAGAGCGCTACTGGAACTAGTTGTCTCAATTTTTGAACCCATGATGGATGGTCTTGGAGAGAGGGATGTTCTTGATGAGGAAAACTTAAGCTGGGATGTAAAGCTAGCCTTGGAATACAAAGATTTGCAAAAAAGGATTATATCATCTGTTTTGTCCTCCTGTTATGCTGGACTAAGAACTTTTGGAAGTAACTAGTTTTAGAGCTCAAACAAACAGTGATCCCATAGTGAAGTTATAAAGTTTATTATAACGGAAAGAATTTGGATGGGGTATCTGAACCCAATTTCATATTGGTGTAATGTATCCAGCATTGCCTTCGCTTGCTGGCTGAAACAATTAATCTTGTGTTGATGTTTATGCTGTAATTAGCTTTCGTGGTTTCTGCTGTTGCTAAAGCATTAAAATGTAGGATGTTTTGAAGATTGGGAGCTTTATCAAATGCATGCATGCAGATAGCATTTATCTTTTGCTTTTTGCAATTTCTTTCACATGCTATCTTTGGATCAAAATATGTATAATGAGGGATGATTGGTCTGAGTAATTTTCTGATTAAGGATGTTATAACTTGTAGTTCGATGTGGTGATTACTTGTTGGAAGCCTAATTATATCTTTAAAAGTGGCTTAAAATTAACGATCGAGGGTGTCGAAGATGTTTGAATTGGTTTCAAGGCATTATCAATTCTCATGATCTCTCACTTCAAACTAGTTAATATAGTTGAAAATATTTACAATTAATTTTTCTTTCGAACACATTAATATGGTATTTTTGTAGGATTATGGTG

Network for GWHGAAEX016987

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00856.27	SET	190	396	7.00E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.110
SRP064423	SRR2545915	Juvenile tuber	10.050
SRP108465	SRR5643513	five period of Gastrodia elata	8.230
	SRR5643514	five period of Gastrodia elata	8.550
	SRR5643515	five period of Gastrodia elata	6.540
	SRR5643524	five period of Gastrodia elata	7.830
	SRR5643525	five period of Gastrodia elata	4.360
	SRR5643528	five period of Gastrodia elata	3.400
	SRR5643658	five period of Gastrodia elata	4.910
	SRR5643659	five period of Gastrodia elata	7.890
	SRR5643660	five period of Gastrodia elata	5.970
	SRR5643661	five period of Gastrodia elata	7.110
	SRR5643662	five period of Gastrodia elata	4.990
	SRR5643663	five period of Gastrodia elata	6.360
	SRR5643664	five period of Gastrodia elata	6.250
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.980
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.680
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.540
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.270
SRP279888	Gastro	Gastrodia elata tuber	7.03
	Juven	Juvenile tuber	8.29
	Mother_Gastro	Mother tuber of Gastrodia elata	2.47
	Mother_Juven	Mother tuber of Juvenile	4.12