Detail information of GWHGAAEX017002/evm.TU.scaffold_8.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31429.00E-22Prenylated rab acceptor 1
nrgi|743849998|ref|XP_010939766.1|7.91E-31PREDICTED: uncharacterized protein At4g29660 [Elaeis guineensis]
Swissprottr|Q94K18|Y4966_ARATH7.00E-23Uncharacterized protein At4g29660
trEMBLtr|M0TK94|M0TK94_MUSAM4.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P24080_001}
TAIRAT4G296609.00E-22embryo defective 2752

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000425154322530454-
Transcript Sequence

Network for GWHGAAEX017002

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms116.390
SRR2545915Juvenile tuber146.740
SRP108465SRR5643513five period of Gastrodia elata55.150
SRR5643514five period of Gastrodia elata64.740
SRR5643515five period of Gastrodia elata65.640
SRR5643524five period of Gastrodia elata58.420
SRR5643525five period of Gastrodia elata141.510
SRR5643528five period of Gastrodia elata156.590
SRR5643658five period of Gastrodia elata172.100
SRR5643659five period of Gastrodia elata88.300
SRR5643660five period of Gastrodia elata87.300
SRR5643661five period of Gastrodia elata88.720
SRR5643662five period of Gastrodia elata113.650
SRR5643663five period of Gastrodia elata104.020
SRR5643664five period of Gastrodia elata130.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.220
SRR6049655Rhizomagastrodiae_C368-T10_good_155.820
SRR6049656Rhizomagastrodiae_C368-T07_good_159.080
SRR6049657Rhizomagastrodiae_C368-T07_good_153.870
SRR6049658Rhizomagastrodiae_C368-T04_good_133.170
SRR6049659Rhizomagastrodiae_C368-T04_good_132.560
SRR6049660Rhizomagastrodiae_C368-T01_good_136.530
SRR6049661Rhizomagastrodiae_C368-T04_good_126.280
SRR6049662Rhizomagastrodiae_C368-T01_good_136.780
SRR6049663Rhizomagastrodiae_C368-T01_good_127.980
SRR6049664Rhizomagastrodiae_C368-T10_good_162.770
SRR6049665Rhizomagastrodiae_C368-T10_good_162.770
SRP279888GastroGastrodia elata tuber 97.47
JuvenJuvenile tuber47.17
Mother_GastroMother tuber of Gastrodia elata 29.82
Mother_JuvenMother tuber of Juvenile 43.11