Detail information of GWHGAAEX017005/evm.TU.scaffold_8.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695034561|ref|XP_009404750.1|9.15E-117PREDICTED: SWI/SNF chromatin-remodeling complex subunit SNF5-like [Musa acuminata subsp. malaccensis]
trEMBLtr|B6T607|B6T607_MAIZE8.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:AC198518.3_FGP003}
TAIRAT5G175107.00E-75Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000426555802672001-
Transcript Sequence

Network for GWHGAAEX017005

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15249.5GLTSCR11152282.30E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.030
SRR2545915Juvenile tuber16.880
SRP108465SRR5643513five period of Gastrodia elata26.510
SRR5643514five period of Gastrodia elata25.220
SRR5643515five period of Gastrodia elata24.190
SRR5643524five period of Gastrodia elata25.300
SRR5643525five period of Gastrodia elata20.420
SRR5643528five period of Gastrodia elata20.770
SRR5643658five period of Gastrodia elata18.360
SRR5643659five period of Gastrodia elata31.680
SRR5643660five period of Gastrodia elata35.670
SRR5643661five period of Gastrodia elata35.310
SRR5643662five period of Gastrodia elata31.410
SRR5643663five period of Gastrodia elata28.350
SRR5643664five period of Gastrodia elata31.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.490
SRR6049655Rhizomagastrodiae_C368-T10_good_122.370
SRR6049656Rhizomagastrodiae_C368-T07_good_122.060
SRR6049657Rhizomagastrodiae_C368-T07_good_120.270
SRR6049658Rhizomagastrodiae_C368-T04_good_117.140
SRR6049659Rhizomagastrodiae_C368-T04_good_120.670
SRR6049660Rhizomagastrodiae_C368-T01_good_121.580
SRR6049661Rhizomagastrodiae_C368-T04_good_118.080
SRR6049662Rhizomagastrodiae_C368-T01_good_122.190
SRR6049663Rhizomagastrodiae_C368-T01_good_121.910
SRR6049664Rhizomagastrodiae_C368-T10_good_126.940
SRR6049665Rhizomagastrodiae_C368-T10_good_126.940
SRP279888GastroGastrodia elata tuber 31.32
JuvenJuvenile tuber24.84
Mother_GastroMother tuber of Gastrodia elata 23.35
Mother_JuvenMother tuber of Juvenile 19.05