Detail information of GWHGAAEX017009/evm.TU.scaffold_8.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|322435954|ref|YP_004218166.1|3.00E-15response regulator receiver protein [Granulicella tundricola MP5ACTX9]
KOGKOG16015.00E-64GATA-4/5/6 transcription factors
nrgi|590634965|ref|XP_007028513.1|5.23E-73Type-a response regulator [Theobroma cacao]
Swissprottr|O80366|ARR9_ARATH1.00E-64Two-component response regulator ARR9
trEMBLtr|A0A061EV85|A0A061EV85_THECC2.00E-73Type-a response regulator {ECO:0000313|EMBL:EOY09015.1}
TAIRAT3G570405.00E-64response regulator 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000429194902921357-
Transcript Sequence

Network for GWHGAAEX017009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00072.23Response_reg121303.80E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K14492ARR-A Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0000160Biological Processphosphorelay signal transduction system

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.300
SRR2545915Juvenile tuber50.020
SRP108465SRR5643513five period of Gastrodia elata15.870
SRR5643514five period of Gastrodia elata27.670
SRR5643515five period of Gastrodia elata46.780
SRR5643524five period of Gastrodia elata20.810
SRR5643525five period of Gastrodia elata25.190
SRR5643528five period of Gastrodia elata26.110
SRR5643658five period of Gastrodia elata13.000
SRR5643659five period of Gastrodia elata138.090
SRR5643660five period of Gastrodia elata53.750
SRR5643661five period of Gastrodia elata89.500
SRR5643662five period of Gastrodia elata64.230
SRR5643663five period of Gastrodia elata42.640
SRR5643664five period of Gastrodia elata155.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.150
SRR6049655Rhizomagastrodiae_C368-T10_good_133.370
SRR6049656Rhizomagastrodiae_C368-T07_good_144.710
SRR6049657Rhizomagastrodiae_C368-T07_good_138.600
SRR6049658Rhizomagastrodiae_C368-T04_good_128.980
SRR6049659Rhizomagastrodiae_C368-T04_good_135.150
SRR6049660Rhizomagastrodiae_C368-T01_good_1105.750
SRR6049661Rhizomagastrodiae_C368-T04_good_125.460
SRR6049662Rhizomagastrodiae_C368-T01_good_138.040
SRR6049663Rhizomagastrodiae_C368-T01_good_1113.690
SRR6049664Rhizomagastrodiae_C368-T10_good_152.570
SRR6049665Rhizomagastrodiae_C368-T10_good_152.570
SRP279888GastroGastrodia elata tuber 31.61
JuvenJuvenile tuber21.25
Mother_GastroMother tuber of Gastrodia elata 214.17
Mother_JuvenMother tuber of Juvenile 126.27