Detail information of GWHGAAEX017010/evm.TU.scaffold_8.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307594652|ref|YP_003900969.1|4.00E-116MCM family protein [Vulcanisaeta distributa DSM 14429]
KOGKOG04820DNA replication licensing factor, MCM7 component
nrgi|672177132|ref|XP_008808650.1|0PREDICTED: DNA replication licensing factor MCM7 [Phoenix dactylifera]
Swissprottr|B8BMI1|MCM7_ORYSI0DNA replication licensing factor MCM7
trEMBLtr|M0S4F2|M0S4F2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P02110_001}
TAIRAT4G020600Minichromosome maintenance (MCM2/3/5) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000429900323019861+
Transcript Sequence

Network for GWHGAAEX017010

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14551.5MCM_N131325.40E-15
PF17207.2MCM_OB1432731.20E-30
PF00493.22MCM3146361.00E-128
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K02210MCM7, CDC47 DNA replication map03030
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113

Gene Ontology

GO term OntologyName
GO:0006260Biological ProcessDNA replication
GO:0006270Biological ProcessDNA replication initiation
GO:0003678Molecular FunctionDNA helicase activity
GO:0005524Molecular FunctionATP binding
GO:0003677Molecular FunctionDNA binding
GO:0042555Cellular ComponentMCM complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.560
SRR2545915Juvenile tuber2.290
SRP108465SRR5643513five period of Gastrodia elata4.270
SRR5643514five period of Gastrodia elata4.380
SRR5643515five period of Gastrodia elata2.460
SRR5643524five period of Gastrodia elata3.150
SRR5643525five period of Gastrodia elata0.250
SRR5643528five period of Gastrodia elata0.520
SRR5643658five period of Gastrodia elata1.020
SRR5643659five period of Gastrodia elata1.820
SRR5643660five period of Gastrodia elata1.660
SRR5643661five period of Gastrodia elata1.630
SRR5643662five period of Gastrodia elata0.680
SRR5643663five period of Gastrodia elata2.150
SRR5643664five period of Gastrodia elata0.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.160
SRR6049655Rhizomagastrodiae_C368-T10_good_110.300
SRR6049656Rhizomagastrodiae_C368-T07_good_110.770
SRR6049657Rhizomagastrodiae_C368-T07_good_16.540
SRR6049658Rhizomagastrodiae_C368-T04_good_15.330
SRR6049659Rhizomagastrodiae_C368-T04_good_12.660
SRR6049660Rhizomagastrodiae_C368-T01_good_18.350
SRR6049661Rhizomagastrodiae_C368-T04_good_18.940
SRR6049662Rhizomagastrodiae_C368-T01_good_117.100
SRR6049663Rhizomagastrodiae_C368-T01_good_110.350
SRR6049664Rhizomagastrodiae_C368-T10_good_112.320
SRR6049665Rhizomagastrodiae_C368-T10_good_112.320
SRP279888GastroGastrodia elata tuber 1.06
JuvenJuvenile tuber2.26
Mother_GastroMother tuber of Gastrodia elata 0.61
Mother_JuvenMother tuber of Juvenile 0.67