Detail information of GWHGAAEX017011/evm.TU.scaffold_8.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|8.00E-20small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00772.00E-134Vesicle coat complex COPII, GTPase subunit SAR1
nrgi|672125636|ref|XP_008786239.1|4.54E-137PREDICTED: GTP-binding protein SAR1A-like [Phoenix dactylifera]
Swissprottr|O04834|SAR1A_ARATH5.00E-135GTP-binding protein SAR1A
trEMBLtr|A0A059AXI2|A0A059AXI2_EUCGR9.00E-137Uncharacterized protein {ECO:0000313|EMBL:KCW58366.1}
TAIRAT4G020802.00E-134secretion-associated RAS super family 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000430563763069312-
Transcript Sequence

Network for GWHGAAEX017011

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf81923.10E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07953SAR1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms204.100
SRR2545915Juvenile tuber185.760
SRP108465SRR5643513five period of Gastrodia elata237.460
SRR5643514five period of Gastrodia elata236.810
SRR5643515five period of Gastrodia elata230.560
SRR5643524five period of Gastrodia elata222.710
SRR5643525five period of Gastrodia elata324.580
SRR5643528five period of Gastrodia elata328.900
SRR5643658five period of Gastrodia elata323.110
SRR5643659five period of Gastrodia elata249.830
SRR5643660five period of Gastrodia elata260.540
SRR5643661five period of Gastrodia elata275.640
SRR5643662five period of Gastrodia elata268.560
SRR5643663five period of Gastrodia elata256.700
SRR5643664five period of Gastrodia elata293.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1219.980
SRR6049655Rhizomagastrodiae_C368-T10_good_1256.620
SRR6049656Rhizomagastrodiae_C368-T07_good_1216.880
SRR6049657Rhizomagastrodiae_C368-T07_good_1229.130
SRR6049658Rhizomagastrodiae_C368-T04_good_1227.840
SRR6049659Rhizomagastrodiae_C368-T04_good_1239.590
SRR6049660Rhizomagastrodiae_C368-T01_good_1215.390
SRR6049661Rhizomagastrodiae_C368-T04_good_1210.800
SRR6049662Rhizomagastrodiae_C368-T01_good_1206.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1213.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1252.200
SRR6049665Rhizomagastrodiae_C368-T10_good_1252.200
SRP279888GastroGastrodia elata tuber 240.10
JuvenJuvenile tuber222.09
Mother_GastroMother tuber of Gastrodia elata 213.63
Mother_JuvenMother tuber of Juvenile 185.41