Detail information of GWHGAAEX017018/evm.TU.scaffold_8.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672182056|ref|XP_008811263.1|9.43E-74PREDICTED: uncharacterized protein LOC103722474 isoform X1 [Phoenix dactylifera]
trEMBLtr|W9QFE3|W9QFE3_9ROSA2.00E-56Uncharacterized protein {ECO:0000313|EMBL:EXB34475.1}
TAIRAT4G253301.00E-22Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000433042513374752-
Transcript Sequence

Network for GWHGAAEX017018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16719.4SAWADEE181501.20E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003682Molecular Functionchromatin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.100
SRR2545915Juvenile tuber24.280
SRP108465SRR5643513five period of Gastrodia elata11.630
SRR5643514five period of Gastrodia elata12.050
SRR5643515five period of Gastrodia elata8.850
SRR5643524five period of Gastrodia elata10.510
SRR5643525five period of Gastrodia elata7.560
SRR5643528five period of Gastrodia elata7.290
SRR5643658five period of Gastrodia elata6.000
SRR5643659five period of Gastrodia elata12.560
SRR5643660five period of Gastrodia elata14.220
SRR5643661five period of Gastrodia elata11.080
SRR5643662five period of Gastrodia elata12.330
SRR5643663five period of Gastrodia elata10.840
SRR5643664five period of Gastrodia elata14.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.200
SRR6049655Rhizomagastrodiae_C368-T10_good_19.040
SRR6049656Rhizomagastrodiae_C368-T07_good_112.440
SRR6049657Rhizomagastrodiae_C368-T07_good_113.210
SRR6049658Rhizomagastrodiae_C368-T04_good_116.180
SRR6049659Rhizomagastrodiae_C368-T04_good_115.080
SRR6049660Rhizomagastrodiae_C368-T01_good_114.940
SRR6049661Rhizomagastrodiae_C368-T04_good_113.160
SRR6049662Rhizomagastrodiae_C368-T01_good_113.040
SRR6049663Rhizomagastrodiae_C368-T01_good_114.290
SRR6049664Rhizomagastrodiae_C368-T10_good_114.940
SRR6049665Rhizomagastrodiae_C368-T10_good_114.940
SRP279888GastroGastrodia elata tuber 21.97
JuvenJuvenile tuber26.50
Mother_GastroMother tuber of Gastrodia elata 21.04
Mother_JuvenMother tuber of Juvenile 31.31