Detail information of GWHGAAEX017029/evm.TU.scaffold_8.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521462539|ref|YP_008149401.1|9.00E-23hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
KOGKOG06580Glycogen synthase kinase-3
nrgi|743783244|ref|XP_010921357.1|0PREDICTED: shaggy-related protein kinase alpha [Elaeis guineensis]
Swissprottr|P43289|KSG3_ARATH0Shaggy-related protein kinase gamma
trEMBLtr|A0A068V400|A0A068V400_COFCA0Coffea canephora
TAIRAT3G058400Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000443429924376560+
Transcript Sequence

Network for GWHGAAEX017029

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase733573.40E-63
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.480
SRR2545915Juvenile tuber45.080
SRP108465SRR5643513five period of Gastrodia elata34.010
SRR5643514five period of Gastrodia elata35.510
SRR5643515five period of Gastrodia elata35.270
SRR5643524five period of Gastrodia elata33.070
SRR5643525five period of Gastrodia elata40.710
SRR5643528five period of Gastrodia elata38.610
SRR5643658five period of Gastrodia elata40.150
SRR5643659five period of Gastrodia elata33.240
SRR5643660five period of Gastrodia elata32.000
SRR5643661five period of Gastrodia elata32.200
SRR5643662five period of Gastrodia elata34.950
SRR5643663five period of Gastrodia elata34.550
SRR5643664five period of Gastrodia elata30.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.920
SRR6049655Rhizomagastrodiae_C368-T10_good_134.710
SRR6049656Rhizomagastrodiae_C368-T07_good_126.470
SRR6049657Rhizomagastrodiae_C368-T07_good_124.740
SRR6049658Rhizomagastrodiae_C368-T04_good_124.660
SRR6049659Rhizomagastrodiae_C368-T04_good_119.160
SRR6049660Rhizomagastrodiae_C368-T01_good_120.880
SRR6049661Rhizomagastrodiae_C368-T04_good_124.840
SRR6049662Rhizomagastrodiae_C368-T01_good_125.660
SRR6049663Rhizomagastrodiae_C368-T01_good_121.390
SRR6049664Rhizomagastrodiae_C368-T10_good_125.860
SRR6049665Rhizomagastrodiae_C368-T10_good_125.860
SRP279888GastroGastrodia elata tuber 30.06
JuvenJuvenile tuber29.13
Mother_GastroMother tuber of Gastrodia elata 24.63
Mother_JuvenMother tuber of Juvenile 21.07