Detail information of GWHGAAEX017048/evm.TU.scaffold_8.99
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|167427543|gb|ABZ80408.1| | 2.00E-159 | class III peroxidase [Casuarina glauca] |
| Swissprot | tr|Q9FJZ9|PER72_ARATH | 3.00E-154 | Peroxidase 72 (Precursor) |
| trEMBL | tr|B0ZC10|B0ZC10_CASGL | 7.00E-160 | Class III peroxidase {ECO:0000313|EMBL:ABZ80408.1} |
| TAIR | AT5G66390 | 1.00E-153 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 5018070 | 5020315 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017048
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 47 | 296 | 2.20E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 813.460 |
| SRR2545915 | Juvenile tuber | 336.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1137.660 |
| SRR5643514 | five period of Gastrodia elata | 596.350 | |
| SRR5643515 | five period of Gastrodia elata | 1258.770 | |
| SRR5643524 | five period of Gastrodia elata | 1071.820 | |
| SRR5643525 | five period of Gastrodia elata | 112.930 | |
| SRR5643528 | five period of Gastrodia elata | 68.920 | |
| SRR5643658 | five period of Gastrodia elata | 21.870 | |
| SRR5643659 | five period of Gastrodia elata | 260.710 | |
| SRR5643660 | five period of Gastrodia elata | 189.340 | |
| SRR5643661 | five period of Gastrodia elata | 194.890 | |
| SRR5643662 | five period of Gastrodia elata | 168.580 | |
| SRR5643663 | five period of Gastrodia elata | 44.930 | |
| SRR5643664 | five period of Gastrodia elata | 29.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 718.630 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 979.020 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 819.140 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 587.480 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 570.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 581.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 760.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 762.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 828.610 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1235.180 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 785.880 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 785.880 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 90.27 |
| Juven | Juvenile tuber | 95.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9,007.81 | |
| Mother_Juven | Mother tuber of Juvenile | 4,723.49 |