Detail information of GWHGAAEX017053/evm.TU.scaffold_8.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428310873|ref|YP_007121850.1|2.00E-44short-chain dehydrogenase [Microcoleus sp. PCC 7113]
KOGKOG12056.00E-110Predicted dehydrogenase
nrgi|743765554|ref|XP_010913000.1|5.00E-174PREDICTED: 11-beta-hydroxysteroid dehydrogenase 1B-like [Elaeis guineensis]
Swissprottr|P0DKC6|HSD1B_ARATH2.00E-11011-beta-hydroxysteroid dehydrogenase 1B
trEMBLtr|M0T6C0|M0T6C0_MUSAM4.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P12220_001}
TAIRAT5G507006.00E-110hydroxysteroid dehydrogenase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000453601165370736-
Transcript Sequence

Network for GWHGAAEX017053

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short492376.40E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.050
SRR2545915Juvenile tuber53.330
SRP108465SRR5643513five period of Gastrodia elata77.350
SRR5643514five period of Gastrodia elata55.250
SRR5643515five period of Gastrodia elata112.950
SRR5643524five period of Gastrodia elata93.470
SRR5643525five period of Gastrodia elata64.290
SRR5643528five period of Gastrodia elata125.470
SRR5643658five period of Gastrodia elata54.940
SRR5643659five period of Gastrodia elata111.550
SRR5643660five period of Gastrodia elata128.870
SRR5643661five period of Gastrodia elata105.660
SRR5643662five period of Gastrodia elata94.910
SRR5643663five period of Gastrodia elata72.090
SRR5643664five period of Gastrodia elata63.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.010
SRR6049655Rhizomagastrodiae_C368-T10_good_119.760
SRR6049656Rhizomagastrodiae_C368-T07_good_139.110
SRR6049657Rhizomagastrodiae_C368-T07_good_125.120
SRR6049658Rhizomagastrodiae_C368-T04_good_112.340
SRR6049659Rhizomagastrodiae_C368-T04_good_111.450
SRR6049660Rhizomagastrodiae_C368-T01_good_130.370
SRR6049661Rhizomagastrodiae_C368-T04_good_123.350
SRR6049662Rhizomagastrodiae_C368-T01_good_137.150
SRR6049663Rhizomagastrodiae_C368-T01_good_137.690
SRR6049664Rhizomagastrodiae_C368-T10_good_131.670
SRR6049665Rhizomagastrodiae_C368-T10_good_131.670
SRP279888GastroGastrodia elata tuber 55.74
JuvenJuvenile tuber12.75
Mother_GastroMother tuber of Gastrodia elata 111.20
Mother_JuvenMother tuber of Juvenile 46.56