Gene detail

Detail information of GWHGAAEX017057/evm.TU.scaffold_8.113

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743835643\|ref\|XP_010935876.1\|	0	PREDICTED: protein-tyrosine sulfotransferase isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q3EDG5\|TPST_ARATH	1.00E-165	Protein-tyrosine sulfotransferase (Precursor)
trEMBL	tr\|M0TJD5\|M0TJD5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P20980_001}
TAIR	AT1G08030	3.00E-35	tyrosylprotein sulfotransferase

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	5422964	5463881	-

Transcript Sequence
>GWHTAAEX017057 AAAATAAAACCCGGCGGTTTCCTTCGCAAGCCAGGCGTTGTTTTGCTTCATATTTTTCAAAATCGTAGGCCATAACTCTACGATTACCACCTCGGGAAGCCATATTTAGGCCCCAAATCCCTTCGCAATTCCCCGACTGCTATTCTTAAGATCTTCTTCACTTTCTTCAACGCTCCGATATACTATCAAACTCCTCTCCTCACCCGTAGGGACCTGTGACCACCGGTAACTTAAGGTGAGAAGGAAGGAAAACCCTAGCAACCTTGCGTTCACTAACAACCGAGTCTTCATCCAAACGCAAGCAAGAAGATCTAAGAAGTCAGGTACAGACGGAGGATGTTGATGGCAAGTACGACTAAGGAATCATTCTTTAACTGGTTAAAGATGGACGGTATTACAAGAACACAAAGGCTTGGGATATTATTCATGCTGATTTCTTTGGCACTTACTTCCACGGGTGATGATGATTTCTACCACTGTGAAAGCATGGTTAGGAAATGGGCAGAATCCTCAGCCAACAACCGAATCAAGGCAGACAAGCTGACCCTAAAGGATTTGTTATTTTTCTTACATATTCCTAGAACTGGGGGACGAACTTATTACTACTGTTTCCTGAAAAAACTTTATGTAAATACGGATGAGTGTCCCCGTTCCTACGATAAACTACGTTTTGACCCAAGGGAACCTAAGTGTCGATTGTTTGTTACTCATGATGATTATAGCTTGCTGTCAAAGCTGCCCAAGGATAAAACATCAGTGGTAACTATATTAAGAAATCCACTTGATCGTGTTTTTAGTACGTATGAATTTGCAGTGGAAGTTGCAGCTAGGTTTCTTGTACACCCAAACCTAACTTCAGCAACACAAATGTCTAGAAAAATGACATCCAGATCTTGTGGAGTTAGTACTCTAGATATATGGCCGTGGAAGTACTTGGTTCCCTGGATGAGGGAAGACCTATTTGCCAGGAGAGTTGTCAGGAAACATACTGAAATAAGAAGCATCAAAGGCACACAAAATCCATATGACGTGAATGAGTTTGTGATGCCTTTACATGATTTTGTTGATGACCCCATGGCACGTGAAATTATTCATAATGGAGCCACCTTTCAGTTGGCTGGTTTAACAAACAATTCATTTCTTGCTGAATCTTTTCAAATACGTGGATGCATCAGGAGTTATCCAAACCTTGGGCACTATGTCTTAGAAGTAGCAAAGGGTAGATTGAATCATATGCTGTATATTGGACTCACAGAAGATCACAAAGCATCAGCAACAATGTTTGCAAATATGGTTGGTTCACAAGTACTTTCTCAGTCAAAAGCATTAAATTCTCATGGTGAAGAAGTGACATCTAATGAAACAGGAACCAGCTCTTTTAGGAACTTTAGTGGTGGCCATCAGGATCAGAATAGTACAGGAGACCAAACAACTAGTGAAGACACTCCAGCATCATATGGAAAAACAGAAGATGAGAATATGACGGTTGAAAAGCTGATGAAGGCCTATGAAACATGCACAGCTACTTTGCGAAAATCACAGGCAAAACGTCGAATTTTATCTTTAAGAAAGATTTCTGCGGCCAACTTTTCGAAGGAGGCACGACTTCAGGTTCCTCAAACGGTAATCCAGAAAATATTATTGATGAACAGCCTAGATGTAGATTTGTATAAACATGCACAACGTCTCTTTATAGAGCAACTGAAGCATCTTATGCAAAGTGAGCATACAAAAACCGAACCACACCATAGGCATTTTCCATCACATATGGAGGCGCAGTATAACCTCTATCGATTCATCACCTGGAATGCAGTCTTTTCGCTAATTCTCACCACAGGCCTCTTTGTTTTTATTGTTGGTGCTGTTGTATCCTCAAGGAGAAGAACTTCCAAAATTAAGGTGTGATTATGCTTAATTTAAATTGACACTTTAAATTTTGTGGGACTGCCAACAAGGGCAAAAGCTCAAGTGCTCAATGAGCAGAGGGAAGGAATTTATTAGTTCTTTTTTGTTTTTTTGGGTGGTTTTATTTATTTTTACCTCTTGCGATGTAATAGGTTTTGTTTTATTTTGATTCTCAGCATTATCTTTGCTGTTGGGAAAAAGGGTTTCATTAGGAATGCTTTAGTTTTATATATATATTTTTATATATTTGAAATTGTGTTGACTAGAAATACTTAGGTCTAATATTACCTGATCAAAACTAGTTGCTTTTTCTGAAACTTTTTAG

Network for GWHGAAEX017057

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00685.26	Sulfotransfer_1	115	163	5.50E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008146	Molecular Function	sulfotransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.620
SRP064423	SRR2545915	Juvenile tuber	7.420
SRP108465	SRR5643513	five period of Gastrodia elata	19.150
	SRR5643514	five period of Gastrodia elata	22.060
	SRR5643515	five period of Gastrodia elata	19.250
	SRR5643524	five period of Gastrodia elata	20.930
	SRR5643525	five period of Gastrodia elata	22.110
	SRR5643528	five period of Gastrodia elata	19.340
	SRR5643658	five period of Gastrodia elata	22.210
	SRR5643659	five period of Gastrodia elata	15.680
	SRR5643660	five period of Gastrodia elata	20.130
	SRR5643661	five period of Gastrodia elata	16.750
	SRR5643662	five period of Gastrodia elata	15.550
	SRR5643663	five period of Gastrodia elata	19.050
	SRR5643664	five period of Gastrodia elata	17.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.250
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.240
SRP279888	Gastro	Gastrodia elata tuber	19.93
	Juven	Juvenile tuber	19.99
	Mother_Gastro	Mother tuber of Gastrodia elata	19.22
	Mother_Juven	Mother tuber of Juvenile	22.22