Detail information of GWHGAAEX017058/evm.TU.scaffold_8.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410668843|ref|YP_006921214.1|1.00E-33serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
KOGKOG00328.00E-96Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|672135818|ref|XP_008791584.1|7.58E-145PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like [Phoenix dactylifera]
Swissprottr|Q9SPK4|PPCK1_ARATH2.00E-96Phosphoenolpyruvate carboxylase kinase 1
trEMBLtr|A5BQJ2|A5BQJ2_VITVI4.00E-128Putative uncharacterized protein {ECO:0000313|EMBL:CAN72597.1}
TAIRAT1G086508.00E-96phosphoenolpyruvate carboxylase kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000454995305501117-
Transcript Sequence

Network for GWHGAAEX017058

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase402961.80E-68
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.550
SRR2545915Juvenile tuber43.450
SRP108465SRR5643513five period of Gastrodia elata30.210
SRR5643514five period of Gastrodia elata73.200
SRR5643515five period of Gastrodia elata51.640
SRR5643524five period of Gastrodia elata55.860
SRR5643525five period of Gastrodia elata316.050
SRR5643528five period of Gastrodia elata78.870
SRR5643658five period of Gastrodia elata147.320
SRR5643659five period of Gastrodia elata75.550
SRR5643660five period of Gastrodia elata42.700
SRR5643661five period of Gastrodia elata72.750
SRR5643662five period of Gastrodia elata209.250
SRR5643663five period of Gastrodia elata119.740
SRR5643664five period of Gastrodia elata380.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.990
SRR6049655Rhizomagastrodiae_C368-T10_good_131.840
SRR6049656Rhizomagastrodiae_C368-T07_good_141.450
SRR6049657Rhizomagastrodiae_C368-T07_good_137.780
SRR6049658Rhizomagastrodiae_C368-T04_good_142.560
SRR6049659Rhizomagastrodiae_C368-T04_good_140.790
SRR6049660Rhizomagastrodiae_C368-T01_good_153.870
SRR6049661Rhizomagastrodiae_C368-T04_good_143.940
SRR6049662Rhizomagastrodiae_C368-T01_good_175.870
SRR6049663Rhizomagastrodiae_C368-T01_good_158.250
SRR6049664Rhizomagastrodiae_C368-T10_good_143.180
SRR6049665Rhizomagastrodiae_C368-T10_good_143.180
SRP279888GastroGastrodia elata tuber 64.64
JuvenJuvenile tuber6.80
Mother_GastroMother tuber of Gastrodia elata 59.53
Mother_JuvenMother tuber of Juvenile 20.32