Detail information of GWHGAAEX017060/evm.TU.scaffold_8.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00484.00E-75Transcription factor, Myb superfamily
nrgi|672135834|ref|XP_008791593.1|3.82E-88PREDICTED: myb-related protein Myb4 [Phoenix dactylifera]
Swissprottr|Q7XBH4|MYB4_ORYSJ8.00E-81Myb-related protein Myb4
trEMBLtr|C5XXT4|C5XXT4_SORBI1.00E-84Putative uncharacterized protein Sb04g026480 {ECO:0000313|EMBL:EES07173.1}
TAIRAT3G232504.00E-75myb domain protein 15

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000456095345610822-
Transcript Sequence

Network for GWHGAAEX017060

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14611.80E-16
PF00249.30Myb_DNA-binding671125.90E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.240
SRR2545915Juvenile tuber22.610
SRP108465SRR5643513five period of Gastrodia elata65.840
SRR5643514five period of Gastrodia elata43.120
SRR5643515five period of Gastrodia elata208.120
SRR5643524five period of Gastrodia elata54.950
SRR5643525five period of Gastrodia elata150.640
SRR5643528five period of Gastrodia elata126.750
SRR5643658five period of Gastrodia elata40.150
SRR5643659five period of Gastrodia elata83.030
SRR5643660five period of Gastrodia elata13.650
SRR5643661five period of Gastrodia elata27.690
SRR5643662five period of Gastrodia elata60.580
SRR5643663five period of Gastrodia elata27.330
SRR5643664five period of Gastrodia elata84.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.830
SRR6049655Rhizomagastrodiae_C368-T10_good_145.410
SRR6049656Rhizomagastrodiae_C368-T07_good_143.930
SRR6049657Rhizomagastrodiae_C368-T07_good_151.630
SRR6049658Rhizomagastrodiae_C368-T04_good_173.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1123.350
SRR6049660Rhizomagastrodiae_C368-T01_good_1116.760
SRR6049661Rhizomagastrodiae_C368-T04_good_161.480
SRR6049662Rhizomagastrodiae_C368-T01_good_159.740
SRR6049663Rhizomagastrodiae_C368-T01_good_1171.530
SRR6049664Rhizomagastrodiae_C368-T10_good_183.270
SRR6049665Rhizomagastrodiae_C368-T10_good_183.270
SRP279888GastroGastrodia elata tuber 18.61
JuvenJuvenile tuber3.30
Mother_GastroMother tuber of Gastrodia elata 1,244.85
Mother_JuvenMother tuber of Juvenile 267.01