Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|428307481\|ref\|YP_007144306.1\|	5.00E-25	50S ribosomal protein L12 [Crinalium epipsammum PCC 9333]
KOG	KOG1715	3.00E-35	Mitochondrial/chloroplast ribosomal protein L12
nr	gi\|643736662\|gb\|KDP42952.1\|	1.16E-42	hypothetical protein JCGZ_23894 [Jatropha curcas]
Swissprot	tr\|P02398\|RK12_SPIOL	2.00E-37	50S ribosomal protein L12, chloroplastic (Precursor)
trEMBL	tr\|A0A067L3E5\|A0A067L3E5_JATCU	4.00E-43	Uncharacterized protein {ECO:0000313\|EMBL:KDP42952.1}
TAIR	AT3G27850	3.00E-35	ribosomal protein L12-C

Scaffold	Start	End	Strand
GWHAAEX00000004	5652700	5657329	-

Transcript Sequence
>GWHTAAEX017062 ATGGCCTCTTTAGCTTTCTCCTCAGTCCCTCTCCACCTTTCGTGGAGATCGTCCTCCTCATCCGCCCTGCCCTTTCCTCCCAAAGCCCTAATCCTCGTCTCCCGCCATCACCTTCGTCTCACCCCCATTTCCGCCTCCTCGAAAATCGAAGAACTCGGAACACAAATACAAAATCTAACCCTAGCGGAAGCCAAAAGCCTCGTTGATCTCCTCCAAGCTCGCCTCGGAATATCAGCTCTATCCCCTTCTATCACCGTTCATTCAGACACTGCTGGAGACCCCAACACCGCCGCTCCAGCCGCCGTTGAGGAGAAAACAGAGTTCGATGTTTTCATTGAGGAGGTGCCCAGTAACGTACGAATTGCTGCCATTAAGGTTGTCAGGGCACTCACTAACCTTCCGCTCAAGGAAGCCAAAGACCTGATTGAAGGCCTTCCGAAGAAGCTCAAGGAGGCTGTTAGCAAGAACGAGGCCGAGGAAGTCAAGAAGAAGCTCGAAGAGGTCTTTTTTTTTTTCAAAATTTTCAAGGTTCGGCTGAAATGAATCAAATGATTCATGTTCAAATCGTATGATTTTGTTCGATTTGAACGAAATAGAACACTTGATTCGAACGATTTCGTTCAATCAAACTATTTCTCTAAATGAAATTGGAATGTTTGAATCGTTTGATCGAACGTCGAAGGCCTCGATGAAGCCGTGGATGAAGTTAAAGGCGTCGATGAAGCTGTGGACGAAGGCGTTGAAATGAACATCGAAGGCGTGGGTTGTGGGAGGAAGGAGCTCCTTTACGTCGAAGAAGAGGGAGCTATCGCATCGTGTTTCGCTACTTCGCGTGAGGGAGCTCTGTGAAATCTTTGATTTTGGCTGATTTGGCCTCCAAAATCTAATTACAATGGTAGTATTTATATTGTTGTAATATAGTTATCTGTACATTTATGGAGCCATTTGAGAGCCATCTAACTTGAAGATTTTGTATAGTTATCTATACAAAATCATAGCTTTGAGTGTTCTCACCATAACAATAAGCATATA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16320.4	Ribosomal_L12_N	48	98	9.10E-09
PF00542.18	Ribosomal_L12	108	168	4.30E-20

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K02935	RP-L7, MRPL12, rplL	Ribosome	map03010

GO term	Ontology	Name
GO:0006412	Biological Process	translation
GO:0003735	Molecular Function	structural constituent of ribosome
GO:0005840	Cellular Component	ribosome

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.080
SRP064423	SRR2545915	Juvenile tuber	7.100
SRP108465	SRR5643513	five period of Gastrodia elata	5.360
	SRR5643514	five period of Gastrodia elata	6.480
	SRR5643515	five period of Gastrodia elata	6.530
	SRR5643524	five period of Gastrodia elata	4.930
	SRR5643525	five period of Gastrodia elata	5.550
	SRR5643528	five period of Gastrodia elata	6.560
	SRR5643658	five period of Gastrodia elata	7.970
	SRR5643659	five period of Gastrodia elata	6.840
	SRR5643660	five period of Gastrodia elata	7.550
	SRR5643661	five period of Gastrodia elata	6.890
	SRR5643662	five period of Gastrodia elata	8.110
	SRR5643663	five period of Gastrodia elata	5.180
	SRR5643664	five period of Gastrodia elata	7.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.090
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.870
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.450
SRP279888	Gastro	Gastrodia elata tuber	9.76
	Juven	Juvenile tuber	3.49
	Mother_Gastro	Mother tuber of Gastrodia elata	4.90
	Mother_Juven	Mother tuber of Juvenile	2.29