Gene detail

Detail information of GWHGAAEX017064/evm.TU.scaffold_8.122

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743763130\|ref\|XP_010911374.1\|	3.09E-90	PREDICTED: uncharacterized protein LOC105037398 [Elaeis guineensis]
trEMBL	tr\|M8ADW5\|M8ADW5_TRIUA	2.00E-84	Uncharacterized protein {ECO:0000313\|EMBL:EMS58809.1, ECO:0000313\|EnsemblPlants:TRIUR3_05117-P1}
TAIR	AT4G24310	1.00E-30	Protein of unknown function (DUF679)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	5713961	5716803	-

Transcript Sequence
>GWHTAAEX017064 GAGTTCCATACCAACGGTCTAAATATCATTTCTTTTGTTCTAAAAAATCATTTAACACTAATCAATTTTTTTTTTAATTTATGCATATAAATAAATAAAAAATGTATTTAATATACAAATACATTAAAACCTTTGCTTATTGAGTTCTCATTAATTCTCATTAATTGCATTCAAGCCTTTGCCTATTGGATTAAAGAGTTTAATAAATACCCATTTTTCAAGTGTGTTTTATGTAAAAACATGATACATAGCTCAATGAATAGATCAAAACTTGTTCTATTTTGGTATGCTAACAGTAAAAATGCGTATGATTATTTTTTGAGATAAATGCAGAAAATTAAAAAAAGATTAGCTTTACCTAAAGCAGATGAGCTCGTGAGCTGCCCTCATCTCTTCCGAGCACTTTCTCAGCTCTGCAATCTTTCTATTATTTTCCCATATTACAATTATTAAAAAAAAAGATTAGCTTTAAAAAAATATCAAATCCTCAATGAAACTAAGCTTTTACACAAATGTTTAAGCACTCCTGCGTGAGATTAAACAATCCTCTCTGCAATATGCGATCAAACTTTGTGCTCGATGTTTTCGGGTTCGAATGAAGCAACTCCTCTCCGCAAACGGAGATCGGGTTGTTATGATTCTAAATCTCTTTTAGGATTTGTAGTTTGAGCAACACTGAACGATTATGAGAACATACAAAAATCAAAAAAACAAACAACAAAAAGTCATAATCAAACTAACACGAAAAAATTACGTGAAAAACTCGATAACAAGAAAAATTACGGAGCCACAACACCAAGAACATCCACTGTGAAAAAGTCATCAAAAGCTTGCAGAATTATTCCCGAGAAACTCTAACCCAGAAGAAGATGAAGATTGCACCATTAGGAAGATTACACAAACCTAGCATCCTTCTCTCTGCCCTTCTGTTTCTAACTCAACTCTTGAGCGTACAACAGTAAACACTGTAGTCAACGAGCCACCGCTTTAAACCTCCACTGTAGGCACCTTCGTAACACTCCGCTATGACCACCACCGCAGCATACCGCTGCTGCCACCACCATAGCACACCGTTGAGACTACTGATGCAGCCCCCTTGTGGTCACCTGATGCAGCACGCCGCTACAGCCAGCCCGTGCAGATCTCCGATGAACATCTCCATTAATGGTTTCCGGGTGCAGCCCCACAGCTGCCCTTGGCTGCAATCTCCGCTATGGCCTTTGGCTGCAGCTTCAGCCCTAAGGCTGTCGCCCCCTTCCCCTTTGCATCACATACAGCCCCCAACATATTTAGGATTTTATATAGAGTCAAGCCAAACCCTATTTTGCCCTAAAGAGGTCTTGGGGCCCAAGGGACAAGTCCCTTCGCTATTGAATCCGTTGCGGGTTCCTGGGCGAGTGCAGACATCTCTACATCCCAGGAACTTGGGCGCCTGAGCGCACACATCTTTGTGCCTCATGCGTTGTGCACGCCCGAGCGCCAGTTGGTTGTAGCCTCTGCGAGCTCCCGGGGCGCACCCGAGTATTTGGCTTGCTACTAGCCCAGTACGACCTTGCCCCGGGACCCGCTGGTTTCCACTGGAACATTGTGCCTTTCCTCGGAACATGGGAACTCTGCTGGCACCTTCTTTGCAGACTCATTTGCGCAATCAGCAATCAGCTTTGGGGAAACTCACCGTAGGAGGACTCGCCGCGGGCATGGACTCGAGGGAACGTGCTAATTAGGGTGATAAACTTGGTTATTTTTTTTAGATTAGATGTAGGTAATATTTAAAATTTGGGTTTTTTATAAATAAATTATAAAGAAAAATTCCCTAAGAAACTCGTTTAATTTTACCAGCCAGCACAATTCCTCCCTCCTCTCCGAAAGCAGGTGATTCTCCCCTTCAGGAGCAAGTTTTACCCGCCCCTTTCTCCCGTCGCAGAGCAAAAGAATCCCATCTCCCAAGCCTCCAAGATGTTCAATAAAATGCCCCACAAATCCAGCAGCTCCAACTACAAAAAATGAAAGAAGAAGAAGAAGAACGCAGCAGTGGGTACAAAATCCTGGTAGACAGCAATGCGCCTGCCTCGACGGAGGAGAAGGAGAGCTGGGAAGACTGCAATGGCGCAAACGAATCGTACCTCTTGTACGTGCTGAACCTGATCCTCAGCGGCACGGCCCGCCTGAACGTCCTCCTCCCCAGCGCCACCATCCTCGCCTTCACAATCTTCGCTCCCCTCCTCACAAACGACGGCGACTGCTCCGCCCTCAACCGATCCCTGACGGTGGTATTCGTCCTCTTCTGCGCCGCCTCCTGCGCCTTCTTCGCCCTGACTGACAGCTTCCGGTCGCCATCGGGAAGGATCTACCACGGCCTGGCCACGCCGAGGGGGATCTGGCCGTTCAACTCCAGGAGGAGAGGGCCGCCGGATCCGGAAAAGTACAGGCTAGGATGGGGAGACCTGTTCCACGGGGCCATGTCCGTGGCCGCATTGTTCACGTTCGCGGGATCGCACAGGGACGTCGTTGCCTGCTACTACCCGAAACTGCCGAGGAAGGTGATAAACTCCGTGCCGCTTGCGGTGGGCTTCGTCGTCAGCGTCTTTTTCGTGATATTTCCTTCCAGGAGGAGAGGGATTGGGCATCCGTTCCTCTTGCAGAGGGGCGCCGTTTATTAGTAGACTTACGGTCCGCCATATTTGGCTACTGCCGAGAGACCATTTAGGTGAAAATCTATAATGAAATCGCGACGAAGTTAATCCTTTGCCATTATTGCGAATTAAATTTATTATTCTAATCACTCCCTGCTTGCAGCTTGACTTACTCATATCCCTGACGTCGCTCTTCTAGCGGACTGCTAC

Network for GWHGAAEX017064

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05078.11	DUF679	51	207	1.90E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.590
SRP064423	SRR2545915	Juvenile tuber	2.180
SRP108465	SRR5643513	five period of Gastrodia elata	5.240
	SRR5643514	five period of Gastrodia elata	4.180
	SRR5643515	five period of Gastrodia elata	4.780
	SRR5643524	five period of Gastrodia elata	4.670
	SRR5643525	five period of Gastrodia elata	1.020
	SRR5643528	five period of Gastrodia elata	1.080
	SRR5643658	five period of Gastrodia elata	1.110
	SRR5643659	five period of Gastrodia elata	6.610
	SRR5643660	five period of Gastrodia elata	6.660
	SRR5643661	five period of Gastrodia elata	7.010
	SRR5643662	five period of Gastrodia elata	4.360
	SRR5643663	five period of Gastrodia elata	3.610
	SRR5643664	five period of Gastrodia elata	4.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.660
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.750
SRP279888	Gastro	Gastrodia elata tuber	2.92
	Juven	Juvenile tuber	4.92
	Mother_Gastro	Mother tuber of Gastrodia elata	5.71
	Mother_Juven	Mother tuber of Juvenile	5.74