Detail information of GWHGAAEX017065/evm.TU.scaffold_8.123
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 2.00E-24 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|672120114|ref|XP_008783314.1| | 0 | PREDICTED: probable receptor-like protein kinase At1g11050 [Phoenix dactylifera] |
| Swissprot | tr|O04086|Y1105_ARATH | 0 | Probable receptor-like protein kinase At1g11050 (Precursor) |
| trEMBL | tr|C5YY70|C5YY70_SORBI | 0 | Putative uncharacterized protein Sb09g020780 {ECO:0000313|EMBL:EES19548.1} |
| TAIR | AT1G11050 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 5716927 | 5719228 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017065
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 293 | 501 | 1.60E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RKF3 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.820 |
| SRR2545915 | Juvenile tuber | 6.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.960 |
| SRR5643514 | five period of Gastrodia elata | 13.380 | |
| SRR5643515 | five period of Gastrodia elata | 26.250 | |
| SRR5643524 | five period of Gastrodia elata | 17.100 | |
| SRR5643525 | five period of Gastrodia elata | 11.810 | |
| SRR5643528 | five period of Gastrodia elata | 26.880 | |
| SRR5643658 | five period of Gastrodia elata | 12.850 | |
| SRR5643659 | five period of Gastrodia elata | 35.720 | |
| SRR5643660 | five period of Gastrodia elata | 25.250 | |
| SRR5643661 | five period of Gastrodia elata | 34.720 | |
| SRR5643662 | five period of Gastrodia elata | 31.160 | |
| SRR5643663 | five period of Gastrodia elata | 19.860 | |
| SRR5643664 | five period of Gastrodia elata | 30.420 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.220 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.070 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.860 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.590 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.670 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.17 |
| Juven | Juvenile tuber | 14.85 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 63.03 | |
| Mother_Juven | Mother tuber of Juvenile | 35.09 |