Gene detail

Detail information of GWHGAAEX017070/evm.TU.scaffold_8.129

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0239	Kinesin (KAR3 subfamily)
nr	gi\|672175413\|ref\|XP_008807759.1\|	PREDICTED: kinesin-4-like [Phoenix dactylifera]
Swissprot	tr\|O81635\|ATK4_ARATH	Kinesin-4
trEMBL	tr\|M0TP97\|M0TP97_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G27000	kinesin 4

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	5843076	5849178	+

Transcript Sequence
>GWHTAAEX017070 ATGATGGCGACCGAGCGATTCTTTTCTATATCAGCTGCATCGGTTTTGGAGGACGTGCTCAAAGAGCATGGGAAGAGGCTAAGCGACTTGGATTTGGCCTCCAGGAAAGCAGAGGAGACGGCAACAAGGCGATTCGAGGCAACCAGATGGCTTAGCAGAATAGTGGGGTTGGTTAGTGGCAAGGATTTGCCAGAGGACCCTTCGGAAGAGGAATTCAGGCTTGGATTGAGAAATGGTCTGATCCTTTGTAATGCACTTAACAAGGTTCAACCTGCAGCGGTCCCAAAGATTGTCGAGAGTTCCGGTGATTCAGTGGTTATCCCAGATGGAGCTGCGTCAGCTTACCAATATTTTGAAAATGTGAGGAATTTTCTTGTTGCTGTTCAGGATATTGGTTTGCCCACATTTGAAGTATCGGATTTGGAACAGGGAGGGAAAAGCTCAAGAATTGTGAACTGCATTCTGGCTCTTAAATCCTACAGTGAATGGAGACAAATGGGTGGTGGTGGGTCCTGGAAGCTTGGTGGAAGTGCCAGATCATCTGTATCTGGAAGAGCTTTCATGAGGAAGAACTATGATCCTTTCTCAAATTCCTTAACGAGGTCTCAGTCGTTGGATTCCCAAGAAAGCTCATGTGCAGAACAAAACTTAAATCAACCGTCTCCTTCTCTGAATGTGCTTGTCCGTGCAATTCTATCCGACAGGAAACCTGAAGAAGTTCCTGTGCTCGTGGAGACCATGCTAAGTAAGTTTATGGAAGAGTTTGGGCGTCGCATTGCAAGCCAAAATGAGCAAGTGAAGACAGCAAAGAAGGGTTTGCAACATGATGGCAAAACTTCCTCAAAATTGAATATTTCCGCTGATGCATCCTCTACAAACTCTGAATTGAAAAAGGAGATTGATGTGAGTAAATGCGTGAGGTTCAAGAAGGGGAATTTCTACAGCACTTTGAGGAATGAAGAGGTATCAAAAGAGCAGCTTTTAAAGCATTACCCTATTCTTGATCGGCAACATAGAGATATTCAGTTTCTTAGGCATGGTCTTCAAACTGCTAAAGCTGGTATGGAGTTCATGCAAATGAAACACATGGAGGAGCTCCATATTATTGGGAAGCATATGTACAGTCTTGCTAATGCTGCATCCGGCTATCACAAAGTGCTTGCAGAAAATAGGAAGCTCTACAATCAGGTGCAAGATCTAAAAGGAAGTATTCGTGTGTATTGCCGGGTCAGACCATTTTTGCCTGGGCAAATGAGTAGCAACACGGTTGGCTGCATTGACGATGGGAACATTACAATAATCACCCCTGCTAAATATGGCAAAGAAGTTCAGAGAACTTTTACTTTTAATAAGGTGTTTGGTCCTTCTGCTTCACAGGAGGAGGTTTTCTCAGATACTCAACCTTTGATTCGATCTGTTATTGATGGATACAACGTCTGCATATTTGCTTATGGCCAGACTGGGTCAGGGAAAACTTTCACAATGAGTGGGCCCAAAATAGTCAATACACAAAGCATGGGTGTAAATTACAGAGCATTAAGCGATCTGTTCAAACTCGCAGAAAGGAGAAGAGGCACATTCATGTATGAAATTTCTGTACAAATGATTGAAATTTATAATGAGCAAGTGCGAGATCTTCTCGTTTTGTCCTTAACAATTAAAACATTAGAAATCAGAAACGGCACACAAAATGGTGTAAATGTGCCTAATGCCAACTTAGTCTCTGTGACTTCAACTGCTGATGTAATTGAACTCATGAACATCGGACTGAGGAATCGTGTTGTTGGGGCAACAGCATTGAATGATCGTAGCAGTCGTTCTCACAGTTGCCTCACTGTTCATGTTCAAGGAAGGGAGTTGACATCCGGATCTATTCTTCGTGGCTGCATGCATCTTGTAGATCTTGCGGGCAGCGAAAGAGTTGACAAGTCTGAGGTCACAGGAGAGAGGCTAAAAGAAGCACAGCACATAAACAAATCCCTTTCAGCCTTGGGCGATGTCATATACGCCCTCGCACAAAATTGCGCTCATGTGCCTTACAGAAACAGCAAGCTCACTCAACTGCTTCAGGATTCTCTCGGAGGGCAAGCAAAGACTCTGATGTTTGTGCACATAAGCCCTGAAATGGATGCCATAGGAGAAACCATCGGCACGCTTAAATTTGCTGAAAGGGTCTCCACAGTTGAGCTCGGTGCGGCTAGACTAAATAAGGCGAGTGGAGAAGAAACAAAGGAGCTTAAGGAGCAGATTGCCAGCCTCAGAGCGGCGTTGGCAAAGGCAGGTGGAGAGTCAACGCCTGATCAATCCACATTGAAGGTTCGAGCACCATCTTCCGGAAATTTCAAAAACAAACTGCATGGAGCGGATCTTCAAAGCTTTCAAAATGGAAACCTTAGATCGCCTATGGGGGAAGTTGGTAACATAGAGGCGCGAAGAAGCAAGTGTGGTGGCGGCAAAAAAGCGACGAGCATTGATCTCCAAGATCTGCTGGTAATCGCGGAAGGCGGGCATCCCTGGCCGGAAAAAGCTTCTCAGAATGGGGAAGATAAAGAAGAAAATGGGGGCTCCGGGGATTGGGTGGATAAGGTTATTGTGATGAACAGCAGCAAGCAGCAGGAATCCCTGCCGGATTTCTTTTGCCGGAGGGGATACGCCCGCTCTTCCGACGAGTTATTCTATCCCGCGATCACAACCGATGATTCTGACGATCTGGATGTTGCCACGAGCGATTCCTCGGAGGCCGACTCCCTGCTCTGGCAGTTCAATCCTCCAAATGGCGGAGGCTCTATTAATAAGAAGATCAAGAAGCCTCAGATGATAGCACGGTCGGCAAATAGTTCGGTTTTCAGGACGCCGAAAAACGCGTATATTCCTTCTCCGTCGTCGTCGTCGTCGAGGAAGACTTCGAGGCTAGGAAGCGCTGCTGGGGCGGTGGATGCCAAAAGTGGGGGGAAACTGAGCAGTGGAAAGTGA

Network for GWHGAAEX017070

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00307.30	CH	43	162	3.90E-15
PF00225.22	Kinesin	409	727	3.40E-102

Protein Sequence

>GWHPAAEX017070
MMATERFFSISAASVLEDVLKEHGKRLSDLDLASRKAEETATRRFEATRWLSRIVGLVSGKDLPEDPSEEEFRLGLRNGLILCNALNKVQPAAVPKIVESSGDSVVIPDGAASAYQYFENVRNFLVAVQDIGLPTFEVSDLEQGGKSSRIVNCILALKSYSEWRQMGGGGSWKLGGSARSSVSGRAFMRKNYDPFSNSLTRSQSLDSQESSCAEQNLNQPSPSLNVLVRAILSDRKPEEVPVLVETMLSKFMEEFGRRIASQNEQVKTAKKGLQHDGKTSSKLNISADASSTNSELKKEIDVSKCVRFKKGNFYSTLRNEEVSKEQLLKHYPILDRQHRDIQFLRHGLQTAKAGMEFMQMKHMEELHIIGKHMYSLANAASGYHKVLAENRKLYNQVQDLKGSIRVYCRVRPFLPGQMSSNTVGCIDDGNITIITPAKYGKEVQRTFTFNKVFGPSASQEEVFSDTQPLIRSVIDGYNVCIFAYGQTGSGKTFTMSGPKIVNTQSMGVNYRALSDLFKLAERRRGTFMYEISVQMIEIYNEQVRDLLVLSLTIKTLEIRNGTQNGVNVPNANLVSVTSTADVIELMNIGLRNRVVGATALNDRSSRSHSCLTVHVQGRELTSGSILRGCMHLVDLAGSERVDKSEVTGERLKEAQHINKSLSALGDVIYALAQNCAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEMDAIGETIGTLKFAERVSTVELGAARLNKASGEETKELKEQIASLRAALAKAGGESTPDQSTLKVRAPSSGNFKNKLHGADLQSFQNGNLRSPMGEVGNIEARRSKCGGGKKATSIDLQDLLVIAEGGHPWPEKASQNGEDKEENGGSGDWVDKVIVMNSSKQQESLPDFFCRRGYARSSDELFYPAITTDDSDDLDVATSDSSEADSLLWQFNPPNGGGSINKKIKKPQMIARSANSSVFRTPKNAYIPSPSSSSSRKTSRLGSAAGAVDAKSGGKLSSGK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding
GO:0005515	Molecular Function	protein binding
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.250
SRP064423	SRR2545915	Juvenile tuber	0.810
SRP108465	SRR5643513	five period of Gastrodia elata	0.790
	SRR5643514	five period of Gastrodia elata	1.840
	SRR5643515	five period of Gastrodia elata	0.810
	SRR5643524	five period of Gastrodia elata	1.000
	SRR5643525	five period of Gastrodia elata	2.130
	SRR5643528	five period of Gastrodia elata	1.130
	SRR5643658	five period of Gastrodia elata	1.780
	SRR5643659	five period of Gastrodia elata	0.290
	SRR5643660	five period of Gastrodia elata	0.140
	SRR5643661	five period of Gastrodia elata	0.230
	SRR5643662	five period of Gastrodia elata	0.160
	SRR5643663	five period of Gastrodia elata	0.140
	SRR5643664	five period of Gastrodia elata	0.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.690
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.240
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.240
SRP279888	Gastro	Gastrodia elata tuber	0.40
	Juven	Juvenile tuber	0.19
	Mother_Gastro	Mother tuber of Gastrodia elata	0.19
	Mother_Juven	Mother tuber of Juvenile	0.04