Detail information of GWHGAAEX017077/evm.TU.scaffold_8.136


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16324.00E-113Uncharacterized PHD Zn-finger protein
nrgi|695066052|ref|XP_009379903.1|6.60E-142PREDICTED: PHD finger protein ALFIN-LIKE 8-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q2R837|ALFL8_ORYSJ8.00E-121PHD finger protein ALFIN-LIKE 8
trEMBLtr|M0RIQ5|M0RIQ5_MUSAM2.00E-142Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P16300_001}
TAIRAT3G427904.00E-113alfin-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000461015176137366+
Transcript Sequence

Network for GWHGAAEX017077

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12165.7Alfin121392.60E-66
PF00628.28PHD1972459.90E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAlfin-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042393Molecular Functionhistone binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.850
SRR2545915Juvenile tuber98.820
SRP108465SRR5643513five period of Gastrodia elata73.520
SRR5643514five period of Gastrodia elata76.450
SRR5643515five period of Gastrodia elata70.100
SRR5643524five period of Gastrodia elata69.320
SRR5643525five period of Gastrodia elata89.860
SRR5643528five period of Gastrodia elata69.140
SRR5643658five period of Gastrodia elata87.790
SRR5643659five period of Gastrodia elata89.830
SRR5643660five period of Gastrodia elata98.290
SRR5643661five period of Gastrodia elata91.090
SRR5643662five period of Gastrodia elata90.370
SRR5643663five period of Gastrodia elata83.490
SRR5643664five period of Gastrodia elata91.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.250
SRR6049655Rhizomagastrodiae_C368-T10_good_159.670
SRR6049656Rhizomagastrodiae_C368-T07_good_173.150
SRR6049657Rhizomagastrodiae_C368-T07_good_186.500
SRR6049658Rhizomagastrodiae_C368-T04_good_169.300
SRR6049659Rhizomagastrodiae_C368-T04_good_168.020
SRR6049660Rhizomagastrodiae_C368-T01_good_180.360
SRR6049661Rhizomagastrodiae_C368-T04_good_169.370
SRR6049662Rhizomagastrodiae_C368-T01_good_161.970
SRR6049663Rhizomagastrodiae_C368-T01_good_164.080
SRR6049664Rhizomagastrodiae_C368-T10_good_170.930
SRR6049665Rhizomagastrodiae_C368-T10_good_170.930
SRP279888GastroGastrodia elata tuber 93.93
JuvenJuvenile tuber79.67
Mother_GastroMother tuber of Gastrodia elata 73.85
Mother_JuvenMother tuber of Juvenile 72.05