Detail information of GWHGAAEX017078/evm.TU.scaffold_8.137


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743765034|ref|XP_010912734.1|0PREDICTED: ankyrin repeat protein SKIP35-like [Elaeis guineensis]
Swissprottr|Q9M1Y3|SKI35_ARATH0Ankyrin repeat protein SKIP35
trEMBLtr|F6HAZ5|F6HAZ5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49431.1}
TAIRAT3G599100Ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000461406876162148+
Transcript Sequence

Network for GWHGAAEX017078

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.930
SRR2545915Juvenile tuber31.050
SRP108465SRR5643513five period of Gastrodia elata24.020
SRR5643514five period of Gastrodia elata21.780
SRR5643515five period of Gastrodia elata20.530
SRR5643524five period of Gastrodia elata20.170
SRR5643525five period of Gastrodia elata19.630
SRR5643528five period of Gastrodia elata29.190
SRR5643658five period of Gastrodia elata23.330
SRR5643659five period of Gastrodia elata31.600
SRR5643660five period of Gastrodia elata37.390
SRR5643661five period of Gastrodia elata30.720
SRR5643662five period of Gastrodia elata36.050
SRR5643663five period of Gastrodia elata40.080
SRR5643664five period of Gastrodia elata43.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.010
SRR6049655Rhizomagastrodiae_C368-T10_good_125.590
SRR6049656Rhizomagastrodiae_C368-T07_good_133.380
SRR6049657Rhizomagastrodiae_C368-T07_good_133.620
SRR6049658Rhizomagastrodiae_C368-T04_good_134.350
SRR6049659Rhizomagastrodiae_C368-T04_good_137.610
SRR6049660Rhizomagastrodiae_C368-T01_good_132.260
SRR6049661Rhizomagastrodiae_C368-T04_good_132.760
SRR6049662Rhizomagastrodiae_C368-T01_good_133.070
SRR6049663Rhizomagastrodiae_C368-T01_good_138.360
SRR6049664Rhizomagastrodiae_C368-T10_good_133.760
SRR6049665Rhizomagastrodiae_C368-T10_good_133.760
SRP279888GastroGastrodia elata tuber 35.29
JuvenJuvenile tuber32.66
Mother_GastroMother tuber of Gastrodia elata 22.70
Mother_JuvenMother tuber of Juvenile 28.41