Detail information of GWHGAAEX017080/evm.TU.scaffold_8.139
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|148655806|ref|YP_001276011.1| | 2.00E-21 | protein kinase [Roseiflexus sp. RS-1] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|695045144|ref|XP_009410356.1| | 0 | PREDICTED: probable receptor-like protein kinase At2g21480 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9T020|Y4391_ARATH | 0 | Probable receptor-like protein kinase At4g39110 (Precursor) |
| trEMBL | tr|F6I0N1|F6I0N1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB60497.1} |
| TAIR | AT4G39110 | 0 | Malectin/receptor-like protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 6203794 | 6206596 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017080
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12819.6 | Malectin_like | 53 | 407 | 3.20E-40 |
| PF07714.16 | Pkinase_Tyr | 533 | 791 | 9.50E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_CrRLK1L-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.050 |
| SRR2545915 | Juvenile tuber | 3.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.060 |
| SRR5643514 | five period of Gastrodia elata | 5.580 | |
| SRR5643515 | five period of Gastrodia elata | 5.360 | |
| SRR5643524 | five period of Gastrodia elata | 4.850 | |
| SRR5643525 | five period of Gastrodia elata | 0.410 | |
| SRR5643528 | five period of Gastrodia elata | 0.270 | |
| SRR5643658 | five period of Gastrodia elata | 0.210 | |
| SRR5643659 | five period of Gastrodia elata | 7.830 | |
| SRR5643660 | five period of Gastrodia elata | 7.200 | |
| SRR5643661 | five period of Gastrodia elata | 7.050 | |
| SRR5643662 | five period of Gastrodia elata | 3.420 | |
| SRR5643663 | five period of Gastrodia elata | 4.660 | |
| SRR5643664 | five period of Gastrodia elata | 2.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.330 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 38.050 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.550 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.52 |
| Juven | Juvenile tuber | 83.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.49 | |
| Mother_Juven | Mother tuber of Juvenile | 37.47 |