Detail information of GWHGAAEX017081/evm.TU.scaffold_8.140
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|338739348|ref|YP_004676310.1| | 6.00E-29 | cytochrome P450 family protein [Hyphomicrobium sp. MC1] |
| KOG | KOG0156 | 2.00E-123 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743763118|ref|XP_010911323.1| | 1.79E-168 | PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis] |
| Swissprot | tr|P24465|C71A1_PERAE | 2.00E-138 | Cytochrome P450 71A1 |
| trEMBL | tr|I6LM44|I6LM44_ELAGV | 1.00E-159 | P450 {ECO:0000313|EMBL:ADM88550.1} |
| TAIR | AT3G26330 | 2.00E-123 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 6207695 | 6209707 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017081
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 32 | 482 | 3.60E-92 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71A25 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.740 |
| SRR2545915 | Juvenile tuber | 1.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.460 |
| SRR5643514 | five period of Gastrodia elata | 2.440 | |
| SRR5643515 | five period of Gastrodia elata | 5.450 | |
| SRR5643524 | five period of Gastrodia elata | 1.560 | |
| SRR5643525 | five period of Gastrodia elata | 0.240 | |
| SRR5643528 | five period of Gastrodia elata | 0.250 | |
| SRR5643658 | five period of Gastrodia elata | 0.310 | |
| SRR5643659 | five period of Gastrodia elata | 1.510 | |
| SRR5643660 | five period of Gastrodia elata | 1.460 | |
| SRR5643661 | five period of Gastrodia elata | 1.850 | |
| SRR5643662 | five period of Gastrodia elata | 1.960 | |
| SRR5643663 | five period of Gastrodia elata | 1.280 | |
| SRR5643664 | five period of Gastrodia elata | 3.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.190 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 53.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.660 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.100 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 54.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 54.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.16 |
| Juven | Juvenile tuber | 9.50 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.03 | |
| Mother_Juven | Mother tuber of Juvenile | 4.50 |