Gene detail

Detail information of GWHGAAEX017083/evm.TU.scaffold_8.142

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|257387472\|ref\|YP_003177245.1\|	1.00E-29	cytochrome P450 [Halomicrobium mukohataei DSM 12286]
KOG	KOG0156	5.00E-120	Cytochrome P450 CYP2 subfamily
nr	gi\|659068773\|ref\|XP_008446152.1\|	1.50E-176	PREDICTED: uncharacterized protein LOC103488960 [Cucumis melo]
Swissprot	tr\|O81970\|C71A9_SOYBN	2.00E-135	Cytochrome P450 71A9
trEMBL	tr\|Q75T49\|Q75T49_MUSAR	2.00E-152	Cytochrome P450 {ECO:0000313\|EMBL:BAD16680.1}
trEMBL	tr\|Q75T49\|Q75T49_MUSAR	2.00E-37	Cytochrome P450 {ECO:0000313\|EMBL:BAD16680.1}
trEMBL	tr\|Q75T49\|Q75T49_MUSAR	3.00E-36	Cytochrome P450 {ECO:0000313\|EMBL:BAD16680.1}
TAIR	AT3G26310	5.00E-120	cytochrome P450, family 71, subfamily B, polypeptide 35

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	6254423	6291879	-

Transcript Sequence
>GWHTAAEX017083 GGCTCGCGTTTGCTCGACTTGCCCGTTCGAAGGCGCTCGCTCACCATCCTCCCCGTTTGCAGCCGTTCGCCCGACCCTTCCTTGACGCCCGACGCCCGACGCCTTCTCCTCGGTCGGCCGTTCACTCGACGCTCCTATTGCAGGAAAAATCGGCTTCCTCTGCCGCCATCTCCGTCCAAGCTTCCCTTCATAGGAAACCTACACCAGCTGGGCCCAAACCTCCATCGCTCCCTTCACAAGCTGTCGGCCAAACATGGCCCGCTCATGCTCCTTCAGCTCGGCCGCGTTCCAACCCTAATTGTCTCAAGCCCAGAGATGGCCGAACAGATCCTGAGGACCCACGATGTCGTCTTCGCAGATCGCCCTGCACTCAAGGCTGCCAGAATCATCTTCTACGGCGGAAAAAGCTTGATCTTTGCGCCGTACGAAGAGTACTGGAGACAGATGAGAAAAGTCTGCACCATGCATCTTCTCAGCTCTCGAATGGTCCAGCAGTTCAAACACGTGCGGACAGAAGGGGTGGCTCTCTTGCTGGAGAGAATCACACGTGCGTCGGCTTCGAAGGATGCTCAAGTTGCCGTTCCCCTGACTAATCTCCTCTACGAATGTTCTAATGATTTGATGTGCAAGACAGTCCTTGGCGATGTAATAAAGGATGATACGAAAAAGAAGGTTCTGATTGAGTTGATTCGCAATATTAGTCCCTTGTTGGGGGCTTTCTATGCTGAGGACTTTTTCCCTGGGCTGTGGTGGGTTGATGTAATTCTTGGATTGGAAGGTCGGCTGAAGAAATACTTCAGGGGATGGGATGCATTGCTTCAGGAGATTCTTGAGGAGCATGAGCAGATGACTGGGCCTATGAGAAATGATATGAACTTTGCTCAGGTGCTCCTCTCCTTGAAGAAAGAGGGGATGCCGCTGGAAAATGATCATATCAAGTGCTTATTATTGGAGATGATTGCTGCAGGAAATGAGACTACAAGTACTTCATTAGGTTGGATCATTGCTGAGCTAATAAGAAACCCAGCCTCACTGAAAAAGGTGCAACAAGAATTAAGAGAAAATTCTCATGTTACTGCTAGAGGATTAGTGGAGGAGGATGACTTAAGTAAAATGAGCTTTTTAAAAGCAGTTATAAAAGAAGCATTTCGTTTGCATTCACCTGTTCCACTGCTATTACCACGAGAGTCCGTTCAAAAATGTGAAATTCAAGGATATGTAATCCCCAAACAAACACAAATATTTGTGAATGTATGGTCCATTGGAAGGGATCCTCGAATTTGGGAAGCACCAGAGGAGTTTAGACCAGAAAGATGGTTAGATTCTACTGTGGATTTTAAAGGTAAGGATATCATTTTCCTTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGTATGCAATTTGCAGTAGCATCTATTGAACTTGTAATGGCAAACTTGCTTTATTTCTTTGATTGGAAGTTGCCCTTTGGGATGGAAAGCTGCAATATGGATATGAGTGAAGGTCCAGGACTTACAGCTCCAAGAAAACAAAACCTTGAACTTGTTGCAATTCCTCGGTTTATCAACTTCATCGGAGGTGCCATGATGCATTCTTTTGTATGGTTCACTGCAATCGTCCTTCTCACATATTATCTCCTTTTTCATCTGTCCTACAAATTCAGGAAAAATCGGCTTCCTCTGCCGCCATCTCCGTCCAAGCTTCCCTTCATAGGAAACCTACACCAGCTGGGCCCAAACCTCCATCGCTCCCTTCACAAGCTGTCGGCCAAACATGGCCCGCTCATGCTCCTTCAGCTCGGCTGCGTTCCAACCCTAATTGTCTCAAGCCCAGAAATGGCCGAACAGGTTTTAAAGACCCACGATGTCGTCTTCGCAAGCCGCCCAGCACTCAAGGCTTCCAGAATCATCTTCTATGACTGCAAAGACATGGGCTTTGCGCCTTACGGAGAGTTCTGGAGACAAATGAGAAAAATCTGCACCGTACATCTACTCAGCTCTCGAATGGTTCATCGCTTCAAACACGTGCGGGAAGAAGGGGTGGCTCTCATGCTGGAGAGAATCACACGTGCTTCGGCTTCGAATGTTGAAAAGCCAGATGCTGAAGTTGCCGTTTCCCTGACTGATGTTCTGGATGAATATGCGAATGATTTGTTGTGCAAGACAGTGCTTGGTGGACTGATAAAGAGTGATACGAAGAAGAAGGCTCTGATCGAGTTGGATATAATCATTGCAGGAAGTGATAGCACAAGCACTTTCTTAAATTGGATCATGGCTGAGCTAATAATAAACCCGACATCAATGCAAAAAGTACAGCAAGAGTTAAGAGAAAAAATTCATGTTACAGATGGACTGCCAATTGAGGTGAAAAACTTAGGTGAAATGGGGTATTTAAAAGCAGCTATAAAAGAAACCTTACGTTTGCATCCACCCGGTCCACTGCTACTACCTCGAGAGTGCATTCAAGAATGTGAAATTCAAGGATATGTAATCCCTAAACAATCAAGAGTTATTGTGAATGCATGGTCTATTGGAAGGGATTCTCAAAATTGGGAAGCAGCAGAAGAATTCATGCCAGAGAGATGGCTTACAATTTGGGATAGCTGCCATTGAAATTGCATTGGTTAACTTGCTTTATTGCTTTGATTGGAAGCTGCCCACTGGCATGAAAAGATGTGATGTGGATTTGAGTGAAACTTCAGGGATTACTGCTCCAAGAAAACAAAAACTTGAACTT

Network for GWHGAAEX017083

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	55	509	8.60E-100
PF00067.21	p450	562	729	1.20E-19
PF00067.21	p450	740	863	1.60E-40

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71A25

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.830
SRP064423	SRR2545915	Juvenile tuber	0.550
SRP108465	SRR5643513	five period of Gastrodia elata	2.870
	SRR5643514	five period of Gastrodia elata	2.490
	SRR5643515	five period of Gastrodia elata	1.710
	SRR5643524	five period of Gastrodia elata	1.110
	SRR5643525	five period of Gastrodia elata	0.030
	SRR5643528	five period of Gastrodia elata	0.200
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.300
	SRR5643660	five period of Gastrodia elata	0.250
	SRR5643661	five period of Gastrodia elata	0.100
	SRR5643662	five period of Gastrodia elata	0.020
	SRR5643663	five period of Gastrodia elata	0.020
	SRR5643664	five period of Gastrodia elata	0.070
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.650
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.990
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.520
SRP279888	Gastro	Gastrodia elata tuber	0.06
	Juven	Juvenile tuber	18.27
	Mother_Gastro	Mother tuber of Gastrodia elata	0.38
	Mother_Juven	Mother tuber of Juvenile	4.93