Detail information of GWHGAAEX017084/evm.TU.scaffold_8.144
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0156 | 5.00E-24 | Cytochrome P450 CYP2 subfamily |
| nr | gi|703123989|ref|XP_010102947.1| | 9.80E-27 | Cytochrome P450 71A1 [Morus notabilis] |
| Swissprot | tr|Q9STK9|C71AO_ARATH | 5.00E-26 | Cytochrome P450 71A24 |
| trEMBL | tr|W9RJY0|W9RJY0_9ROSA | 4.00E-27 | Cytochrome P450 71A1 {ECO:0000313|EMBL:EXB94465.1} |
| TAIR | AT1G11610 | 5.00E-24 | cytochrome P450, family 71, subfamily A, polypeptide 18 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 6330289 | 6330618 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017084
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 2 | 109 | 3.90E-08 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71A24 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |