Detail information of GWHGAAEX017085/evm.TU.scaffold_8.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262199173|ref|YP_003270382.1|8.00E-07cytochrome P450 [Haliangium ochraceum DSM 14365]
KOGKOG01564.00E-54Cytochrome P450 CYP2 subfamily
nrgi|672181417|ref|XP_008810925.1|2.03E-56PREDICTED: cytochrome P450 71A1-like, partial [Phoenix dactylifera]
Swissprottr|Q9SAB6|C71AI_ARATH4.00E-55Cytochrome P450 71A18
trEMBLtr|R0H1R0|R0H1R0_9BRAS2.00E-56Uncharacterized protein {ECO:0000313|EMBL:EOA18555.1}
TAIRAT4G133104.00E-54cytochrome P450, family 71, subfamily A, polypeptide 20

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000463520286355931-
Transcript Sequence

Network for GWHGAAEX017085

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450332163.10E-23
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP71A18

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005506Molecular Functioniron ion binding
GO:0020037Molecular Functionheme binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.790
SRR2545915Juvenile tuber8.910
SRP108465SRR5643513five period of Gastrodia elata19.730
SRR5643514five period of Gastrodia elata30.110
SRR5643515five period of Gastrodia elata18.660
SRR5643524five period of Gastrodia elata24.560
SRR5643525five period of Gastrodia elata0.490
SRR5643528five period of Gastrodia elata1.760
SRR5643658five period of Gastrodia elata0.360
SRR5643659five period of Gastrodia elata7.040
SRR5643660five period of Gastrodia elata38.790
SRR5643661five period of Gastrodia elata9.400
SRR5643662five period of Gastrodia elata2.550
SRR5643663five period of Gastrodia elata1.830
SRR5643664five period of Gastrodia elata0.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.260
SRR6049655Rhizomagastrodiae_C368-T10_good_155.670
SRR6049656Rhizomagastrodiae_C368-T07_good_152.410
SRR6049657Rhizomagastrodiae_C368-T07_good_154.200
SRR6049658Rhizomagastrodiae_C368-T04_good_1117.660
SRR6049659Rhizomagastrodiae_C368-T04_good_1121.290
SRR6049660Rhizomagastrodiae_C368-T01_good_1103.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1156.300
SRR6049662Rhizomagastrodiae_C368-T01_good_177.740
SRR6049663Rhizomagastrodiae_C368-T01_good_163.370
SRR6049664Rhizomagastrodiae_C368-T10_good_135.460
SRR6049665Rhizomagastrodiae_C368-T10_good_135.460
SRP279888GastroGastrodia elata tuber 54.87
JuvenJuvenile tuber262.15
Mother_GastroMother tuber of Gastrodia elata 66.31
Mother_JuvenMother tuber of Juvenile 84.81