Gene detail

Database	Orthologs	E value	Annotation
nr	gi\|743764891\|ref\|XP_010912661.1\|	1.85E-121	PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Elaeis guineensis]
Swissprot	tr\|A1Y2B7\|SGS3_MAIZE	4.00E-98	Protein SUPPRESSOR OF GENE SILENCING 3 homolog
trEMBL	tr\|A0A061DL43\|A0A061DL43_THECC	1.00E-106	XS domain-containing protein / XS zinc finger domain-containing protein-related isoform 1 {ECO:0000313\|EMBL:EOX92791.1}
TAIR	AT5G23570	7.00E-97	XS domain-containing protein / XS zinc finger domain-containing protein-related

Scaffold	Start	End	Strand
GWHAAEX00000004	6643191	6676684	+

Transcript Sequence
>GWHTAAEX017092 ATGATCGTGCGCAGAAAGGGAGTGTCGCTCGTACCTGAAGGGCTCATCCTTAGCCTACCGAGCTCCTCTCCCTTCAGTTGGAGACTTCCCCATTCTTCCTTTGCCTGCCTTGTAGAACTCCTAGAGGCGAAAGGAATAGCCGACGATCGGTTCGGGGGGATTGTCGATTTGCAAACCCTAAGAGTTCCTAAAGGTGAACGTAATAGCTGTCGATTGTTTGGATGGATTGACGATTTTCGAAACCCTAATCGATTTAGAGGAGCTGTTAAAGAGACGAGAAGGGATCCTATTGCCGATCGAAGAACAGAAACTCCAAATTTATGTTCGCAAGATCGTTGGAGTAAGATGACGTGTACATCTGGTTCACAAGTTGCGGAAATGCAGTGTTCTGATGGTGCTGCTGCAGGAAGAAGCATTCACAACCGTTGGTCTCAGGTCATTAATCCAGACGGATCAGTTGGTGGAGGAAGTTCTATTCCTCAACTATCAAATAGCAGTTGGGATTCTTGGGAAATTTCTTTCAATGTGTCGCCTCAAATTGGGTGGCAATGGTCTGAAAGAGCTGATTTTGGTGATAGGGGTGCTAATGATGACAATGAGCTGCTAAATAATAGTGAGGATGATATTAGTGATGGTTTTGACTCTGATGATAGTCAAAGAAGCCATGATTCACGAAAAAAGAATAAATGGTTGAGGCCATTTTTTGAATCTTTGGATAATCTGAGTTTAGAGCAAATAATGAAACAGGCTAGACAGTGGCACTGCCCAGCATGTCAGGATGGTCCAGGAGCTATTAACTGGTACATTGGTCTGCAACCTCTAATGGCACATGCAAAGACTAAAGGAAAAATAAGGTTGAGGCTTCACAGGGAACTAGCTGAACTTTTGGAGGAGGAACTACAAAGAAGGGGTGCATCGTTCACAGCACCTTGGGAAGCATTTGGAAAATGGAAGGGTCTTTGTGAAACTACCTCTGACCATGAGGTTGTTTGGCCTCCAATGGTGGTTGTAATGAATACACTACTAGAAAAAGATGAGAAAGATAAGTGGAAAGGCATGTGCAGCCAAGAGCTTCTTGAATATTTTAGTACTTATGCAGCAGTAAAAGCTCGTCATTCCTTTGGTCCAGATGGACACCGAGGAATGAGTGTTCTAATCTTTGAAACCTCAGCAATGGGATATTTAATAGCTGAGCAATTGCACAAGCAATTTTTATGTGAGGGAAGAGATCGCAAAGCTTGGGAAATGTGTCCTGAACTGTTCTGTCCTGAGGGAAAACGCCAGCTCTATGGCTTTTTGGCATCCAAGGAAGACATGATGATATTTAACCAGCATTCCCAAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module8

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03470.13	zf-XS	255	293	8.80E-08
PF03468.13	XS	326	439	4.30E-30

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0031047	Biological Process	gene silencing by RNA

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	250.030
SRP064423	SRR2545915	Juvenile tuber	210.790
SRP108465	SRR5643513	five period of Gastrodia elata	42.710
	SRR5643514	five period of Gastrodia elata	41.890
	SRR5643515	five period of Gastrodia elata	37.190
	SRR5643524	five period of Gastrodia elata	37.400
	SRR5643525	five period of Gastrodia elata	50.840
	SRR5643528	five period of Gastrodia elata	40.980
	SRR5643658	five period of Gastrodia elata	50.400
	SRR5643659	five period of Gastrodia elata	46.000
	SRR5643660	five period of Gastrodia elata	53.070
	SRR5643661	five period of Gastrodia elata	47.450
	SRR5643662	five period of Gastrodia elata	52.410
	SRR5643663	five period of Gastrodia elata	55.670
	SRR5643664	five period of Gastrodia elata	55.070
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	64.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	80.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	61.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	72.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	63.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	59.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	41.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	48.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	42.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	42.350
SRP279888	Gastro	Gastrodia elata tuber	50.39
	Juven	Juvenile tuber	78.19
	Mother_Gastro	Mother tuber of Gastrodia elata	28.80
	Mother_Juven	Mother tuber of Juvenile	43.61