Detail information of GWHGAAEX017094/evm.TU.scaffold_8.156


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672142784|ref|XP_008795255.1|0PREDICTED: MACPF domain-containing protein At4g24290-like [Phoenix dactylifera]
Swissprottr|Q9STW5|MACP2_ARATH0MACPF domain-containing protein At4g24290
trEMBLtr|M5XBD0|M5XBD0_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23249.1}
TAIRAT4G242900MAC/Perforin domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000467167606747238+
Transcript Sequence

Network for GWHGAAEX017094

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01823.18MACPF1063166.30E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.610
SRR2545915Juvenile tuber29.150
SRP108465SRR5643513five period of Gastrodia elata29.810
SRR5643514five period of Gastrodia elata23.980
SRR5643515five period of Gastrodia elata42.870
SRR5643524five period of Gastrodia elata30.310
SRR5643525five period of Gastrodia elata60.930
SRR5643528five period of Gastrodia elata98.800
SRR5643658five period of Gastrodia elata52.840
SRR5643659five period of Gastrodia elata26.530
SRR5643660five period of Gastrodia elata28.890
SRR5643661five period of Gastrodia elata30.240
SRR5643662five period of Gastrodia elata35.890
SRR5643663five period of Gastrodia elata25.130
SRR5643664five period of Gastrodia elata24.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.570
SRR6049655Rhizomagastrodiae_C368-T10_good_127.880
SRR6049656Rhizomagastrodiae_C368-T07_good_127.630
SRR6049657Rhizomagastrodiae_C368-T07_good_126.430
SRR6049658Rhizomagastrodiae_C368-T04_good_132.880
SRR6049659Rhizomagastrodiae_C368-T04_good_137.230
SRR6049660Rhizomagastrodiae_C368-T01_good_133.320
SRR6049661Rhizomagastrodiae_C368-T04_good_129.160
SRR6049662Rhizomagastrodiae_C368-T01_good_126.580
SRR6049663Rhizomagastrodiae_C368-T01_good_129.430
SRR6049664Rhizomagastrodiae_C368-T10_good_134.450
SRR6049665Rhizomagastrodiae_C368-T10_good_134.450
SRP279888GastroGastrodia elata tuber 28.07
JuvenJuvenile tuber30.07
Mother_GastroMother tuber of Gastrodia elata 141.07
Mother_JuvenMother tuber of Juvenile 173.03