Detail information of GWHGAAEX017097/evm.TU.scaffold_8.160


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18442.00E-59PHD Zn-finger proteins
nrgi|672167649|ref|XP_008803796.1|8.14E-68PREDICTED: PHD finger protein At1g33420-like [Phoenix dactylifera]
Swissprottr|Q9C810|Y1342_ARATH5.00E-60PHD finger protein At1g33420
trEMBLtr|M0SGQ4|M0SGQ4_MUSAM5.00E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P21880_001}
TAIRAT1G334202.00E-59RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000468380716838784-
Transcript Sequence

Network for GWHGAAEX017097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.28PHD1592064.70E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.110
SRR2545915Juvenile tuber28.010
SRP108465SRR5643513five period of Gastrodia elata31.910
SRR5643514five period of Gastrodia elata22.420
SRR5643515five period of Gastrodia elata27.450
SRR5643524five period of Gastrodia elata21.270
SRR5643525five period of Gastrodia elata42.400
SRR5643528five period of Gastrodia elata40.010
SRR5643658five period of Gastrodia elata42.360
SRR5643659five period of Gastrodia elata35.390
SRR5643660five period of Gastrodia elata46.160
SRR5643661five period of Gastrodia elata39.730
SRR5643662five period of Gastrodia elata43.210
SRR5643663five period of Gastrodia elata38.280
SRR5643664five period of Gastrodia elata48.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.660
SRR6049655Rhizomagastrodiae_C368-T10_good_118.230
SRR6049656Rhizomagastrodiae_C368-T07_good_123.810
SRR6049657Rhizomagastrodiae_C368-T07_good_129.690
SRR6049658Rhizomagastrodiae_C368-T04_good_120.800
SRR6049659Rhizomagastrodiae_C368-T04_good_121.940
SRR6049660Rhizomagastrodiae_C368-T01_good_125.830
SRR6049661Rhizomagastrodiae_C368-T04_good_118.950
SRR6049662Rhizomagastrodiae_C368-T01_good_115.680
SRR6049663Rhizomagastrodiae_C368-T01_good_118.880
SRR6049664Rhizomagastrodiae_C368-T10_good_123.290
SRR6049665Rhizomagastrodiae_C368-T10_good_123.290
SRP279888GastroGastrodia elata tuber 37.54
JuvenJuvenile tuber41.77
Mother_GastroMother tuber of Gastrodia elata 47.41
Mother_JuvenMother tuber of Juvenile 48.50