Detail information of GWHGAAEX017124/evm.TU.scaffold_8.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|566182585|ref|XP_002312113.2|7.32E-58hypothetical protein POPTR_0008s05890g [Populus trichocarpa]
Swissprottr|Q9S7C9|ESCA_ARATH4.00E-22Putative DNA-binding protein ESCAROLA
trEMBLtr|B9HMK7|B9HMK7_POPTR3.00E-58Uncharacterized protein {ECO:0000313|EMBL:EEE89480.2}
TAIRAT4G178001.00E-39Predicted AT-hook DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000482247318225249+
Transcript Sequence

Network for GWHGAAEX017124

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03479.14DUF29611001.40E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.300
SRR2545915Juvenile tuber3.730
SRP108465SRR5643513five period of Gastrodia elata39.200
SRR5643514five period of Gastrodia elata26.530
SRR5643515five period of Gastrodia elata27.430
SRR5643524five period of Gastrodia elata29.880
SRR5643525five period of Gastrodia elata17.740
SRR5643528five period of Gastrodia elata10.110
SRR5643658five period of Gastrodia elata10.180
SRR5643659five period of Gastrodia elata22.830
SRR5643660five period of Gastrodia elata29.840
SRR5643661five period of Gastrodia elata32.450
SRR5643662five period of Gastrodia elata18.600
SRR5643663five period of Gastrodia elata21.810
SRR5643664five period of Gastrodia elata17.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.540
SRR6049655Rhizomagastrodiae_C368-T10_good_136.760
SRR6049656Rhizomagastrodiae_C368-T07_good_123.060
SRR6049657Rhizomagastrodiae_C368-T07_good_124.610
SRR6049658Rhizomagastrodiae_C368-T04_good_129.980
SRR6049659Rhizomagastrodiae_C368-T04_good_127.210
SRR6049660Rhizomagastrodiae_C368-T01_good_131.860
SRR6049661Rhizomagastrodiae_C368-T04_good_135.630
SRR6049662Rhizomagastrodiae_C368-T01_good_115.360
SRR6049663Rhizomagastrodiae_C368-T01_good_112.180
SRR6049664Rhizomagastrodiae_C368-T10_good_118.450
SRR6049665Rhizomagastrodiae_C368-T10_good_118.450
SRP279888GastroGastrodia elata tuber 6.06
JuvenJuvenile tuber15.43
Mother_GastroMother tuber of Gastrodia elata 9.18
Mother_JuvenMother tuber of Juvenile 10.45