Detail information of GWHGAAEX017135/evm.TU.scaffold_8.216


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672165646|ref|XP_008802734.1|0PREDICTED: glucan endo-1,3-beta-glucosidase [Phoenix dactylifera]
Swissprottr|P52409|E13B_WHEAT1.00E-174Glucan endo-1,3-beta-glucosidase (Precursor)
trEMBLtr|M0REB6|M0REB6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P00890_001}
TAIRAT3G554302.00E-154O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000490469739050157+
Transcript Sequence

Network for GWHGAAEX017135

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17273408.10E-77
PF07983.12X83574277.10E-18
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.730
SRR2545915Juvenile tuber12.760
SRP108465SRR5643513five period of Gastrodia elata48.210
SRR5643514five period of Gastrodia elata23.010
SRR5643515five period of Gastrodia elata85.880
SRR5643524five period of Gastrodia elata37.360
SRR5643525five period of Gastrodia elata56.660
SRR5643528five period of Gastrodia elata179.030
SRR5643658five period of Gastrodia elata86.740
SRR5643659five period of Gastrodia elata39.160
SRR5643660five period of Gastrodia elata17.180
SRR5643661five period of Gastrodia elata50.020
SRR5643662five period of Gastrodia elata41.050
SRR5643663five period of Gastrodia elata20.410
SRR5643664five period of Gastrodia elata29.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.640
SRR6049655Rhizomagastrodiae_C368-T10_good_141.480
SRR6049656Rhizomagastrodiae_C368-T07_good_125.850
SRR6049657Rhizomagastrodiae_C368-T07_good_117.410
SRR6049658Rhizomagastrodiae_C368-T04_good_114.200
SRR6049659Rhizomagastrodiae_C368-T04_good_110.060
SRR6049660Rhizomagastrodiae_C368-T01_good_126.710
SRR6049661Rhizomagastrodiae_C368-T04_good_116.640
SRR6049662Rhizomagastrodiae_C368-T01_good_154.330
SRR6049663Rhizomagastrodiae_C368-T01_good_148.620
SRR6049664Rhizomagastrodiae_C368-T10_good_139.580
SRR6049665Rhizomagastrodiae_C368-T10_good_139.580
SRP279888GastroGastrodia elata tuber 7.22
JuvenJuvenile tuber7.09
Mother_GastroMother tuber of Gastrodia elata 270.72
Mother_JuvenMother tuber of Juvenile 146.21