Detail information of GWHGAAEX017139/evm.TU.scaffold_8.224


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122479|ref|XP_008784572.1|5.18E-14PREDICTED: metallothionein-like protein type 2 [Phoenix dactylifera]
Swissprottr|Q0IMG5|MT4A_ORYSJ7.00E-19Metallothionein-like protein 4A
trEMBLtr|Q93WW3|Q93WW3_NARPS1.00E-12Metallothionein-like protein type 2 {ECO:0000313|EMBL:AAL16908.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000492304219232290-
Transcript Sequence

Network for GWHGAAEX017139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01439.17Metallothio_21772.90E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1982.150
SRR2545915Juvenile tuber2590.090
SRP108465SRR5643513five period of Gastrodia elata3009.700
SRR5643514five period of Gastrodia elata2315.130
SRR5643515five period of Gastrodia elata2183.220
SRR5643524five period of Gastrodia elata2593.560
SRR5643525five period of Gastrodia elata5142.120
SRR5643528five period of Gastrodia elata3815.940
SRR5643658five period of Gastrodia elata6004.080
SRR5643659five period of Gastrodia elata992.110
SRR5643660five period of Gastrodia elata870.900
SRR5643661five period of Gastrodia elata916.820
SRR5643662five period of Gastrodia elata2601.430
SRR5643663five period of Gastrodia elata2663.950
SRR5643664five period of Gastrodia elata3209.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12849.310
SRR6049655Rhizomagastrodiae_C368-T10_good_12036.590
SRR6049656Rhizomagastrodiae_C368-T07_good_12229.200
SRR6049657Rhizomagastrodiae_C368-T07_good_11574.890
SRR6049658Rhizomagastrodiae_C368-T04_good_11966.030
SRR6049659Rhizomagastrodiae_C368-T04_good_12223.390
SRR6049660Rhizomagastrodiae_C368-T01_good_11615.800
SRR6049661Rhizomagastrodiae_C368-T04_good_11487.640
SRR6049662Rhizomagastrodiae_C368-T01_good_11852.330
SRR6049663Rhizomagastrodiae_C368-T01_good_11960.470
SRR6049664Rhizomagastrodiae_C368-T10_good_15179.810
SRR6049665Rhizomagastrodiae_C368-T10_good_15179.810
SRP279888GastroGastrodia elata tuber 2,093.59
JuvenJuvenile tuber1,396.92
Mother_GastroMother tuber of Gastrodia elata 1,307.46
Mother_JuvenMother tuber of Juvenile 1,990.01