Detail information of GWHGAAEX017142/evm.TU.scaffold_8.231
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|224371368|ref|YP_002605532.1| | 2.00E-35 | hypothetical protein HRM2_43120 [Desulfobacterium autotrophicum HRM2] |
| KOG | KOG0945 | 2.00E-81 | Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase |
| nr | gi|720034135|ref|XP_010266643.1| | 1.68E-105 | PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Nelumbo nucifera] |
| trEMBL | tr|F6HXY1|F6HXY1_VITVI | 6.00E-96 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB59304.1} |
| TAIR | AT3G11470 | 2.00E-81 | 4'-phosphopantetheinyl transferase superfamily |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 9415149 | 9434883 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017142
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01648.19 | ACPS | 147 | 244 | 2.10E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K06133 | LYS5, acpT | Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008897 | Molecular Function | holo-[acyl-carrier-protein] synthase activity |
| GO:0000287 | Molecular Function | magnesium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 83.160 |
| SRR2545915 | Juvenile tuber | 47.510 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.360 |
| SRR5643514 | five period of Gastrodia elata | 9.820 | |
| SRR5643515 | five period of Gastrodia elata | 11.160 | |
| SRR5643524 | five period of Gastrodia elata | 7.550 | |
| SRR5643525 | five period of Gastrodia elata | 12.830 | |
| SRR5643528 | five period of Gastrodia elata | 10.590 | |
| SRR5643658 | five period of Gastrodia elata | 14.350 | |
| SRR5643659 | five period of Gastrodia elata | 11.810 | |
| SRR5643660 | five period of Gastrodia elata | 15.600 | |
| SRR5643661 | five period of Gastrodia elata | 14.210 | |
| SRR5643662 | five period of Gastrodia elata | 13.320 | |
| SRR5643663 | five period of Gastrodia elata | 15.360 | |
| SRR5643664 | five period of Gastrodia elata | 13.820 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.300 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.290 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.570 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.530 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.990 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.990 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.24 |
| Juven | Juvenile tuber | 10.97 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.39 | |
| Mother_Juven | Mother tuber of Juvenile | 8.00 |