Detail information of GWHGAAEX017153/evm.TU.scaffold_8.246


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694902|ref|YP_008797956.1|3.00E-12ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG04252.00E-95Ubiquitin-protein ligase
nrgi|743780856|ref|XP_010920634.1|1.89E-112PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Elaeis guineensis]
Swissprottr|Q42540|UBC7_ARATH4.00E-99Ubiquitin-conjugating enzyme E2 7
trEMBLtr|M0TCL5|M0TCL5_MUSAM3.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P34220_001}
TAIRAT3G464602.00E-95ubiquitin-conjugating enzyme 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000498335659883773+
Transcript Sequence

Network for GWHGAAEX017153

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con111601.40E-52
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10575UBE2G1, UBC7 Protein processing in endoplasmic reticulum map04141
Ubiquitin mediated proteolysismap04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms117.120
SRR2545915Juvenile tuber154.120
SRP108465SRR5643513five period of Gastrodia elata79.190
SRR5643514five period of Gastrodia elata75.850
SRR5643515five period of Gastrodia elata68.630
SRR5643524five period of Gastrodia elata71.220
SRR5643525five period of Gastrodia elata95.830
SRR5643528five period of Gastrodia elata135.610
SRR5643658five period of Gastrodia elata155.400
SRR5643659five period of Gastrodia elata88.660
SRR5643660five period of Gastrodia elata98.450
SRR5643661five period of Gastrodia elata89.630
SRR5643662five period of Gastrodia elata114.450
SRR5643663five period of Gastrodia elata116.840
SRR5643664five period of Gastrodia elata142.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_197.720
SRR6049655Rhizomagastrodiae_C368-T10_good_1131.770
SRR6049656Rhizomagastrodiae_C368-T07_good_178.650
SRR6049657Rhizomagastrodiae_C368-T07_good_193.510
SRR6049658Rhizomagastrodiae_C368-T04_good_1105.050
SRR6049659Rhizomagastrodiae_C368-T04_good_195.200
SRR6049660Rhizomagastrodiae_C368-T01_good_186.160
SRR6049661Rhizomagastrodiae_C368-T04_good_190.140
SRR6049662Rhizomagastrodiae_C368-T01_good_161.170
SRR6049663Rhizomagastrodiae_C368-T01_good_166.550
SRR6049664Rhizomagastrodiae_C368-T10_good_170.210
SRR6049665Rhizomagastrodiae_C368-T10_good_170.210
SRP279888GastroGastrodia elata tuber 165.01
JuvenJuvenile tuber100.00
Mother_GastroMother tuber of Gastrodia elata 48.93
Mother_JuvenMother tuber of Juvenile 69.12