Detail information of GWHGAAEX017157/evm.TU.scaffold_8.251


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|530779864|ref|YP_008431664.1|7.00E-29hypothetical protein N186_01315 [Thermofilum sp. 1910b]
KOGKOG00782.00E-134GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
nrgi|672175368|ref|XP_008807735.1|1.16E-147PREDICTED: ras-related protein RABE1c-like isoform X2 [Phoenix dactylifera]
Swissprottr|O24466|RAE1A_ARATH8.00E-135Ras-related protein RABE1a
trEMBLtr|M0TX31|M0TX31_MUSAM2.00E-147Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P03220_001}
TAIRAT5G598402.00E-134Ras-related small GTP-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000499364689970755+
Transcript Sequence

Network for GWHGAAEX017157

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00071.21Ras171782.20E-66
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K07901RAB8A, MEL AMPK signaling pathway map04152
Endocytosismap04144
Autophagy - animalmap04140
Tight junctionmap04530
Pancreatic secretionmap04972

Gene Ontology

GO term OntologyName
GO:0003924Molecular FunctionGTPase activity
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms125.250
SRR2545915Juvenile tuber113.600
SRP108465SRR5643513five period of Gastrodia elata109.560
SRR5643514five period of Gastrodia elata116.410
SRR5643515five period of Gastrodia elata112.640
SRR5643524five period of Gastrodia elata119.360
SRR5643525five period of Gastrodia elata153.340
SRR5643528five period of Gastrodia elata199.250
SRR5643658five period of Gastrodia elata176.410
SRR5643659five period of Gastrodia elata80.720
SRR5643660five period of Gastrodia elata80.710
SRR5643661five period of Gastrodia elata79.880
SRR5643662five period of Gastrodia elata64.800
SRR5643663five period of Gastrodia elata78.010
SRR5643664five period of Gastrodia elata63.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1117.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1152.690
SRR6049656Rhizomagastrodiae_C368-T07_good_1122.830
SRR6049657Rhizomagastrodiae_C368-T07_good_1130.600
SRR6049658Rhizomagastrodiae_C368-T04_good_1143.340
SRR6049659Rhizomagastrodiae_C368-T04_good_1147.630
SRR6049660Rhizomagastrodiae_C368-T01_good_1123.780
SRR6049661Rhizomagastrodiae_C368-T04_good_1134.380
SRR6049662Rhizomagastrodiae_C368-T01_good_1133.220
SRR6049663Rhizomagastrodiae_C368-T01_good_1135.040
SRR6049664Rhizomagastrodiae_C368-T10_good_1158.210
SRR6049665Rhizomagastrodiae_C368-T10_good_1158.210
SRP279888GastroGastrodia elata tuber 97.58
JuvenJuvenile tuber139.76
Mother_GastroMother tuber of Gastrodia elata 170.62
Mother_JuvenMother tuber of Juvenile 204.14