Gene detail

Detail information of GWHGAAEX017160/evm.TU.scaffold_8.256

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|294507855\|ref\|YP_003571913.1\|	7.00E-40	lysophospholipase [Salinibacter ruber M8]
KOG	KOG1455	1.00E-144	Lysophospholipase
nr	gi\|743787496\|ref\|XP_010922433.1\|	9.96E-170	PREDICTED: caffeoylshikimate esterase-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9C942\|CSE_ARATH	3.00E-53	Caffeoylshikimate esterase
trEMBL	tr\|M0TM19\|M0TM19_MUSAM	4.00E-161	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P02670_001}
TAIR	AT2G39420	1.00E-144	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000004	10067793	10070888	-

Transcript Sequence
>GWHTAAEX017160 GTTTTTTTAAATTATTTTTTTGAGAATTAAAAAATTAACTAAAAATAAAAACAAAATCCTCAAAAGATATTAATATTGAAAATTTGACAAAAGTATATGCTGCTTCCCCACTTTGACACGGCAAACAAATCTAAAGAAAGTTCAATTGCAAAGTGCATTCCCTTTCTCTCTCTCTAAGAAAAAACCTGAAAGCCTTTGCTAAACATTCCCATTCAGGTTATTCTCATCATCAAAGAAGATTTTAACCTATGTCAGGAGGTATTGGAAGTGTCAGGTATGAAGAGGAATTCACGCCTGGTTCTGGAGGCATGAGACTGTTTGCTTGCGCATGGCTTCCTGAGAAGCGAGATCCAAAATCCCTAGTTTTTCTCTGCCATGGATATGGCATGGAATGCAGCATCTCAATGAGAGTAACCGGCACTCGATTAGCAAAGGCCGGATTCGCCGTTTATGGTATAGATTATAGAGGGCATGGGAAGTCCACTGGATTGCAGGGATATATTCCAAGATTTGATGAACTTGTCAACGATTGTTCTGTATATTTTACCTCTGTTTGTGATATGAGAGAGAACAAGTCTAAGCTGAGATTTCTGCTTGGTGAATCCATGGGCGGAGCAGTTGCTCTTCTCCTGCATAGGAAGAAGCCATCCTTTTGGCATGGAGCTGTTTTAGTTGCTCCTATGTGCAAGATTGCTGAAGAGATAAAGCCTCATCCTCTTGTGATCAAAACGTTAACAAAACTGAGCAGCATTATACCAAAATGGAAGATAGTTCCTACAAAGGACATCACTGACAGTGCATTCAAGAATCCAGACTGGAGAGAAGAGATTCGAAACAATCCTTTTTGCTACAAGGGGAAGCCTCGCCTTAAAACAGCCAAAGAGCTTCTGATGGTCAGCATGGACATTGAGAAGAACCTTAGCCAGGTGACGCTGCCTTTCCTTGTTGTTCACGGCGGCGACGATACGGTAACGGATCCATCTGTGAGCAAAGCTCTGTACGACGCCTCTGCGAGCAAAGACAAGACCTTTAAACTGTATCCAGGAATGTGGCACGCGTTGACGTCTGCAGAGCCACAGCAGAATCTTCATCTCGTTTTCTCTGACATTCTGTCTTGGCTCGATGAGAGATCCATCAGAATGAGCCTTATGCCATTGGATATCAAGACCGGAGCTTTTGAAGATAGCCGCAGGGCCAAACCTTCAAAGTTTGCAAACAAGAAAAGAGTCAATAGCTTAACTCCACTAGGGACTGTATAGTATCAACATTTAAGCTGCACTTATTTTATTAAATAGAATTATAGTAGAATTTTATGAAGGTGTTGTTTGGTAACAGGGTCTAAGCAGGTTTTACTTGAGTAAATCCTTCACATGTTCTCAAAATTAAGAGTGCAAAGCCATCCCCATATCAACCCAACACCAATTTAATTCACAAAACTAGAAGAAAGAGCTCAAAGTTAGCATTTTCTATCAACATGCAAATGTTAATCATCAAAGCAATGTATAAGTACAGTATGTGGTTAGCCCACAAACTAGCTGCTGCAGGATTACAAATTTTTAACAACAAATTTCCATAACCAGCCTATTTTAACCAACACTGGTAAATGATTTCATTGTTATACTTTTAAATTATGAAATCCTATATCCAAG

Network for GWHGAAEX017160

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12146.7	Hydrolase_4	34	272	1.10E-64

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01054	MGLL	Metabolic pathways	map01100
		Glycerolipid metabolism	map00561
		Regulation of lipolysis in adipocytes	map04923
		Retrograde endocannabinoid signaling	map04723
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	115.290
SRP064423	SRR2545915	Juvenile tuber	69.280
SRP108465	SRR5643513	five period of Gastrodia elata	51.490
	SRR5643514	five period of Gastrodia elata	62.420
	SRR5643515	five period of Gastrodia elata	49.190
	SRR5643524	five period of Gastrodia elata	53.420
	SRR5643525	five period of Gastrodia elata	32.570
	SRR5643528	five period of Gastrodia elata	70.620
	SRR5643658	five period of Gastrodia elata	49.590
	SRR5643659	five period of Gastrodia elata	29.840
	SRR5643660	five period of Gastrodia elata	32.080
	SRR5643661	five period of Gastrodia elata	22.570
	SRR5643662	five period of Gastrodia elata	25.280
	SRR5643663	five period of Gastrodia elata	20.110
	SRR5643664	five period of Gastrodia elata	35.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	49.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	50.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	40.660
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	49.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	76.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	86.740
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	56.110
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	55.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	32.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	52.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	47.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	47.380
SRP279888	Gastro	Gastrodia elata tuber	32.99
	Juven	Juvenile tuber	57.00
	Mother_Gastro	Mother tuber of Gastrodia elata	246.08
	Mother_Juven	Mother tuber of Juvenile	123.59