Detail information of GWHGAAEX017170/evm.TU.scaffold_8.268


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333982986|ref|YP_004512196.1|1.00E-42CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase [Methylomonas methanica MC09]
KOGKOG16173.00E-94CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase
nrgi|743842287|ref|XP_010937763.1|4.12E-107PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Elaeis guineensis]
Swissprottr|O80952|PGPS1_ARATH8.00E-95CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic (Precursor)
trEMBLtr|B9F7E2|B9F7E2_ORYSJ6.00E-98Putative uncharacterized protein {ECO:0000313|EMBL:EEE58822.1}
TAIRAT2G392903.00E-94phosphatidylglycerolphosphate synthase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000041028517010304359-
Transcript Sequence

Network for GWHGAAEX017170

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01066.20CDP-OH_P_transf1592256.30E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00995pgsA, PGS1 Metabolic pathways map01100
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName
GO:0008654Biological Processphospholipid biosynthetic process
GO:0008444Molecular FunctionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groups
GO:0016020Cellular Componentmembrane
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.950
SRR2545915Juvenile tuber22.950
SRP108465SRR5643513five period of Gastrodia elata16.970
SRR5643514five period of Gastrodia elata14.030
SRR5643515five period of Gastrodia elata16.550
SRR5643524five period of Gastrodia elata15.340
SRR5643525five period of Gastrodia elata19.820
SRR5643528five period of Gastrodia elata15.980
SRR5643658five period of Gastrodia elata19.780
SRR5643659five period of Gastrodia elata22.590
SRR5643660five period of Gastrodia elata23.450
SRR5643661five period of Gastrodia elata24.650
SRR5643662five period of Gastrodia elata26.660
SRR5643663five period of Gastrodia elata20.960
SRR5643664five period of Gastrodia elata20.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.440
SRR6049655Rhizomagastrodiae_C368-T10_good_113.310
SRR6049656Rhizomagastrodiae_C368-T07_good_118.320
SRR6049657Rhizomagastrodiae_C368-T07_good_126.000
SRR6049658Rhizomagastrodiae_C368-T04_good_124.300
SRR6049659Rhizomagastrodiae_C368-T04_good_128.090
SRR6049660Rhizomagastrodiae_C368-T01_good_123.720
SRR6049661Rhizomagastrodiae_C368-T04_good_119.220
SRR6049662Rhizomagastrodiae_C368-T01_good_116.900
SRR6049663Rhizomagastrodiae_C368-T01_good_118.150
SRR6049664Rhizomagastrodiae_C368-T10_good_115.800
SRR6049665Rhizomagastrodiae_C368-T10_good_115.800
SRP279888GastroGastrodia elata tuber 30.39
JuvenJuvenile tuber35.69
Mother_GastroMother tuber of Gastrodia elata 27.74
Mother_JuvenMother tuber of Juvenile 34.85