Detail information of GWHGAAEX017174/evm.TU.scaffold_8.272
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 1.00E-27 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|743787778|ref|XP_010922499.1| | 0 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Elaeis guineensis] |
| Swissprot | tr|C0LGI2|Y1677_ARATH | 0 | Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor) |
| trEMBL | tr|K3ZH80|K3ZH80_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si025932m} |
| TAIR | AT2G37050 | 0 | Leucine-rich repeat protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000004 | 10449816 | 10520769 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017174
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12819.6 | Malectin_like | 80 | 411 | 8.00E-77 |
| PF07714.16 | Pkinase_Tyr | 650 | 851 | 1.60E-43 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-I-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 90.070 |
| SRR2545915 | Juvenile tuber | 72.310 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.650 |
| SRR5643514 | five period of Gastrodia elata | 23.200 | |
| SRR5643515 | five period of Gastrodia elata | 19.300 | |
| SRR5643524 | five period of Gastrodia elata | 19.970 | |
| SRR5643525 | five period of Gastrodia elata | 25.510 | |
| SRR5643528 | five period of Gastrodia elata | 14.030 | |
| SRR5643658 | five period of Gastrodia elata | 26.800 | |
| SRR5643659 | five period of Gastrodia elata | 24.190 | |
| SRR5643660 | five period of Gastrodia elata | 25.160 | |
| SRR5643661 | five period of Gastrodia elata | 17.850 | |
| SRR5643662 | five period of Gastrodia elata | 22.790 | |
| SRR5643663 | five period of Gastrodia elata | 29.830 | |
| SRR5643664 | five period of Gastrodia elata | 28.770 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.510 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.490 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 44.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 35.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 40.790 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 40.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 33.890 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.360 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.360 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.69 |
| Juven | Juvenile tuber | 34.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.32 | |
| Mother_Juven | Mother tuber of Juvenile | 14.52 |