Detail information of GWHGAAEX017175/evm.TU.scaffold_8.274


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672130965|ref|XP_008789033.1|6.09E-53PREDICTED: dof zinc finger protein DOF3.2-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q84TE9|DOF53_ARATH3.00E-39Dof zinc finger protein DOF5.3
trEMBLtr|M0RFR6|M0RFR6_MUSAM7.00E-49Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P05890_001}
TAIRAT5G602001.00E-38TARGET OF MONOPTEROS 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000041053705410538582+
Transcript Sequence

Network for GWHGAAEX017175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof441011.30E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.720
SRR2545915Juvenile tuber10.880
SRP108465SRR5643513five period of Gastrodia elata16.880
SRR5643514five period of Gastrodia elata23.140
SRR5643515five period of Gastrodia elata10.290
SRR5643524five period of Gastrodia elata14.710
SRR5643525five period of Gastrodia elata71.630
SRR5643528five period of Gastrodia elata39.100
SRR5643658five period of Gastrodia elata61.200
SRR5643659five period of Gastrodia elata16.220
SRR5643660five period of Gastrodia elata11.690
SRR5643661five period of Gastrodia elata13.170
SRR5643662five period of Gastrodia elata17.550
SRR5643663five period of Gastrodia elata23.310
SRR5643664five period of Gastrodia elata35.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.340
SRR6049655Rhizomagastrodiae_C368-T10_good_132.270
SRR6049656Rhizomagastrodiae_C368-T07_good_117.280
SRR6049657Rhizomagastrodiae_C368-T07_good_118.700
SRR6049658Rhizomagastrodiae_C368-T04_good_114.960
SRR6049659Rhizomagastrodiae_C368-T04_good_116.210
SRR6049660Rhizomagastrodiae_C368-T01_good_115.680
SRR6049661Rhizomagastrodiae_C368-T04_good_116.980
SRR6049662Rhizomagastrodiae_C368-T01_good_118.930
SRR6049663Rhizomagastrodiae_C368-T01_good_115.810
SRR6049664Rhizomagastrodiae_C368-T10_good_124.080
SRR6049665Rhizomagastrodiae_C368-T10_good_124.080
SRP279888GastroGastrodia elata tuber 14.38
JuvenJuvenile tuber6.33
Mother_GastroMother tuber of Gastrodia elata 4.97
Mother_JuvenMother tuber of Juvenile 1.37